RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 HOXB8P17481 243 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 TBXAS1P24557 533 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 PON1P27169 355 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 TPM4P67936 248 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 FOXK1P85037 733 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 CUL2Q13617 745 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 UVSSAQ2YD98 709 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 ANKRD54Q6NXT1 300 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 FAM171BQ6P995 826 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 RNF19BQ6ZMZ0 732 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 APTXQ7Z2E3 356 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 LRRTM3Q86VH5 581 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 UNC93AQ86WB7 457 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 DCP1BQ8IZD4 617 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 C2orf15Q8WU43 125 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 HLA-CQ95604 372 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 PKMYT1Q99640 499 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 INTS2Q9H0H0 1204 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 MAN1C1Q9NR34 630 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 CLEC1BQ9P126 229 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 NME7Q9Y5B8 376 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 MYO16Q9Y6X6 1858 aa12.71□□□□□ -0.37
PDLIM5-208ENST00000504489 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 A8MXQ7 604 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 GOLGA6L19H0YKK7 550 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 TBX10O75333 385 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 SPATA31D3P0C874 917 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 SLC9A1P19634 815 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 ELF1P32519 619 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 GCNT1Q02742 428 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 KCNMA1Q12791 1236 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 LRMPQ12912 555 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 MAPRE1Q15691 268 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 PHLDB3Q6NSJ2 640 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 SPATA31D4Q6ZUB0 917 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 CCDC149Q6ZUS6 474 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 TNIP3Q96KP6 325 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
PDLIM5-208ENST00000504489 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 MTMR11A4FU01 709 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 HCRTO43612 131 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ATP2C2O75185 946 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 CILPO75339 1184 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ZMYND10O75800 440 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 VNN2O95498 520 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 HOXA9P31269 272 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 NDST1P52848 882 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ADCY1Q08828 1119 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 FKBP15Q5T1M5 1219 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 LIN9Q5TKA1 542 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 DPY19L2P1Q6NXN4 242 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 EP400NLQ6ZTU2 488 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ARHGEF19Q8IW93 802 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 UBR7Q8N806 425 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 CMASQ8NFW8 434 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 SPPL2BQ8TCT7 592 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 WHAMMQ8TF30 809 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 PGLYRP2Q96PD5 576 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ARID3AQ99856 593 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 KRTAP3-2Q9BYR7 98 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 RHOBTB2Q9BYZ6 727 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 SFXN1Q9H9B4 322 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 CISHQ9NSE2 258 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms