RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 CST3P01034 146 aaPredicted RBP8.32□□□□□ -1.08
SKP2-203ENST00000504386 HLA-DRAP01903 254 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 WEE2P0C1S8 567 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 HAPLN1P10915 354 aaPredicted RBP8.32□□□□□ -1.08
SKP2-203ENST00000504386 LAMP2P13473 410 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 PFKLP17858 780 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 DDX6P26196 483 aaKnown RBP eCLIP8.32□□□□□ -1.08
SKP2-203ENST00000504386 GCLMP48507 274 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 EPHA5P54756 1037 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
SKP2-203ENST00000504386 SLC8A3P57103 927 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 PFKPQ01813 784 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 TDGQ13569 410 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 TTI2Q6NXR4 508 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 FAM171BQ6P995 826 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 SASS6Q6UVJ0 657 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 GET4Q7L5D6 327 aaPredicted RBP8.32□□□□□ -1.08
SKP2-203ENST00000504386 ATAD1Q8NBU5 361 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 B3GALNT2Q8NCR0 500 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 ANKRD20A12PQ8NF67 263 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 MYCBPAPQ8TBZ2 947 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 ZNF516Q92618 1163 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 ERCC4Q92889 916 aaPredicted RBP8.32□□□□□ -1.08
SKP2-203ENST00000504386 CORO1BQ9BR76 489 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 NAT10Q9H0A0 1025 aaKnown RBP8.32□□□□□ -1.08
SKP2-203ENST00000504386 THAP9Q9H5L6 903 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 ANO10Q9NW15 660 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 RAB20Q9NX57 234 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.32□□□□□ -1.08
SKP2-203ENST00000504386 CHD7Q9P2D1 2997 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 SZT2Q5T011 3432 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 TRANK1O15050 2925 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 VWA8A3KMH1 1905 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 LETM1O95202 739 aaPredicted RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 SEC24AO95486 1093 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 OR4Q2P0C623 313 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 TRIM49P0CI25 452 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 TRIM49CP0CI26 452 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 IGFBP6P24592 240 aaPredicted RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 CLCN6P51797 869 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 NLRP12P59046 1061 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 DLG4P78352 724 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 TMEM31Q5JXX7 168 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 CCDC183Q5T5S1 534 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 ISM2Q6H9L7 571 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 DNAJB7Q7Z6W7 309 aaPredicted RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 PLEKHO2Q8TD55 490 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 KBTBD7Q8WVZ9 684 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 MRPS31Q92665 395 aaKnown RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 EDAQ92838 391 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 FGF13Q92913 245 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 SLC35C1Q96A29 364 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 TRMT2BQ96GJ1 504 aaKnown RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 SMARCD1Q96GM5 515 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 SPATA17Q96L03 361 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 NT5C1BQ96P26 610 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 RTP3Q9BQQ7 232 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 NT5C1AQ9BXI3 368 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 SRRTQ9BXP5 876 aaKnown RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 SLITRK6Q9H5Y7 841 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 MMRN2Q9H8L6 949 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 ZFP14Q9HCL3 533 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 OBP2AQ9NY56 170 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 DNMT3BQ9UBC3 853 aaKnown RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 COQ4Q9Y3A0 265 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 ANK1P16157 1881 aa8.31□□□□□ -1.08
SKP2-203ENST00000504386 MTCL1Q9Y4B5 1905 aaKnown RBP8.31□□□□□ -1.08
SKP2-203ENST00000504386 TRIM49BA6NDI0 452 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 ANHXE9PGG2 379 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 DPYSL4O14531 572 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 ECI2O75521 394 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 RTN3O95197 1032 aaPredicted RBP8.3□□□□□ -1.08
SKP2-203ENST00000504386 VNN1O95497 513 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 AFPP02771 609 aaKnown RBP8.3□□□□□ -1.08
SKP2-203ENST00000504386 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 MYL4P12829 197 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 PTPN1P18031 435 aaKnown RBP8.3□□□□□ -1.08
SKP2-203ENST00000504386 ACAT1P24752 427 aaKnown RBP8.3□□□□□ -1.08
SKP2-203ENST00000504386 WEE1P30291 646 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 GRIK1P39086 918 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 FMO5P49326 533 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 ZXDAP98168 799 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 PPP3CAQ08209 521 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 INCA1Q0VD86 236 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 ENOSF1Q7L5Y1 443 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 NPAS3Q8IXF0 933 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 CRYBG2Q8N1P7 616 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 STKLD1Q8NE28 680 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 PDZD8Q8NEN9 1154 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 TAS1R2Q8TE23 839 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 DEPDC1BQ8WUY9 529 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 SMARCD2Q92925 531 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 JAKMIP2Q96AA8 810 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms