RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 TDRD10Q5VZ19 366 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 GAREM2Q75VX8 874 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 ITIH5Q86UX2 942 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 DCP1BQ8IZD4 617 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 TMEM86AQ8N2M4 240 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 PJA1Q8NG27 643 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 ZSCAN18Q8TBC5 510 aaPredicted RBP19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 SPATA18Q8TC71 538 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 ATOH1Q92858 354 aaPredicted RBP19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 ACBD6Q9BR61 282 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 MRPL45Q9BRJ2 306 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 MKNK1Q9BUB5 465 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 FOXQ1Q9C009 403 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 XYLT2Q9H1B5 865 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 ZFP14Q9HCL3 533 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 GREB1Q4ZG55 1949 aa19.31■□□□□ 0.68
SH3TC1-208ENST00000504223 VPS13AQ96RL7 3174 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 MYBPHLA2RUH7 354 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 ATP2C2O75185 946 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 PRPF40AO75400 957 aaKnown RBP19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 RFX1P22670 979 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 VIPR2P41587 438 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 MYL6P60660 151 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 TSPY1Q01534 308 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 MYO1EQ12965 1108 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 ZCWPW2Q504Y3 356 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 VITQ6UXI7 678 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 GUF1Q8N442 669 aaKnown RBP19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 GIPC2Q8TF65 315 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 SHDQ96IW2 340 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 PI4K2AQ9BTU6 479 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 GPR88Q9GZN0 384 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 IL21Q9HBE4 155 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 GTF3C4Q9UKN8 822 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 SIT1Q9Y3P8 196 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 COL4A2P08572 1712 aa19.3■□□□□ 0.68
SH3TC1-208ENST00000504223 NUP210Q8TEM1 1887 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 GADD45BO75293 160 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 VNN1O95497 513 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 FGF19O95750 216 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 C4BPAP04003 597 aaKnown RBP19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 GLULP15104 373 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 PSMC1P62191 440 aaKnown RBP19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 MYL7Q01449 175 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 FAM160A1Q05DH4 1040 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 GRM2Q14416 872 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 NFE2Q16621 373 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 SDHAF4Q5VUM1 108 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 DPH6Q7L8W6 267 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 DNASE1L2Q92874 299 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 RSPRY1Q96DX4 576 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 CRTAC1Q9NQ79 661 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 PCDHB5Q9Y5E4 795 aa19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 ZFHX2Q9C0A1 2572 aaPredicted RBP19.29■□□□□ 0.68
SH3TC1-208ENST00000504223 KANSL1LA0AUZ9 987 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 SHISA7A6NL88 538 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 AKAP3O75969 853 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 DCNP07585 359 aaKnown RBP19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 PSMC3P17980 439 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 WARSP23381 471 aaKnown RBP19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 CYP2F1P24903 491 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 GABRR2P28476 465 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 LHX1P48742 406 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 VEPH1Q14D04 833 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 NFIL3Q16649 462 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 CEP135Q66GS9 1140 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 FAM171BQ6P995 826 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 FAM200AQ8TCP9 573 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 SYT15Q9BQS2 421 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 TRMT61BQ9BVS5 477 aaKnown RBP19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 ATXN3LQ9H3M9 355 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 SLITRK6Q9H5Y7 841 aa19.28■□□□□ 0.68
SH3TC1-208ENST00000504223 GOLGA6L4A6NEF3 574 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 CALUO43852 315 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 LRRN2O75325 713 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 STAU1O95793 577 aaKnown RBP19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 HMGA1P17096 107 aaKnown RBP19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 NR2F2P24468 414 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 NBL1P41271 181 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 ANGPT1Q15389 498 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 WDR72Q3MJ13 1102 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 TMEM150AQ86TG1 271 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 MFSD6LQ8IWD5 586 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 SPATA20Q8TB22 786 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 DEPDC1BQ8WUY9 529 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 MMS19Q96T76 1030 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 BRD9Q9H8M2 597 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 ABCB6Q9NP58 842 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 TRPV5Q9NQA5 729 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 HEBP1Q9NRV9 189 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 CIZ1Q9ULV3 898 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 R3HCC1Q9Y3T6 440 aaKnown RBP19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 MTF2Q9Y483 593 aaPredicted RBP19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 PCDHA5Q9Y5H7 936 aa19.27■□□□□ 0.68
SH3TC1-208ENST00000504223 TICRRQ7Z2Z1 1910 aa19.27■□□□□ 0.67
SH3TC1-208ENST00000504223 ANAPC1Q9H1A4 1944 aa19.27■□□□□ 0.67
SH3TC1-208ENST00000504223 HEPACAM2A8MVW5 462 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 PROB1E7EW31 1015 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 ARNTLO00327 626 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms