RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CDH2P19022 906 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 CAP2P40123 477 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 RGS4P49798 205 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 TOB1P50616 345 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 SPDYAQ5MJ70 313 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 C6orf10Q5SRN2 563 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 ANKRD13AQ8IZ07 590 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 IPMKQ8NFU5 416 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 DTX3LQ8TDB6 740 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 TFB1MQ8WVM0 346 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 LATS2Q9NRM7 1088 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 CCND1P24385 295 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 NAMPTP43490 491 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 PLA2G4AP47712 749 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 PCSK7Q16549 785 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 EFL1Q7Z2Z2 1120 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 GARTP22102 1010 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 CPT1AP50416 773 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 VCPP55072 806 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 MAPRE1Q15691 268 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 TFR2Q9UP52 801 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 NCAM1P13591 858 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 GIT2Q14161 759 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 Q4G0T1 1027 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 YAF2Q8IY57 180 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF555Q8NEP9 628 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 DPP3Q9NY33 737 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 CYP2B6P20813 491 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 AKT1P31749 480 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 KIZQ2M2Z5 673 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 CASKIN2Q8WXE0 1202 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 ANXA9O76027 345 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 SGPL1O95470 568 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 GZMAP12544 262 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 TAGAPQ8N103 731 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF669Q96BR6 464 aaPredicted RBP17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 ZDHHC15Q96MV8 337 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 EHD4Q9H223 541 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 B2RBV5 119 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 MTFR1Q15390 333 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 SEC23AQ15436 765 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 THTPAQ9BU02 230 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 PKP3Q9Y446 797 aa17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.22■□□□□ 0.35
PCDHA1-203ENST00000504120 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 ZSCAN9O15535 394 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 AKAP10O43572 662 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 RSPH10BP0C881 870 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 SLC25A41Q8N5S1 370 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CD274Q9NZQ7 290 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CCL15-CCL14A0A0B4J2E2 113 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 SUPT3HB4E1H0 165 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 APOA4P06727 396 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CCL15Q16663 113 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 KDM7AQ6ZMT4 941 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 C3orf20Q8ND61 904 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 TMC2Q8TDI7 906 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF518BQ9C0D4 1074 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 SUFUQ9UMX1 484 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 C16orf96A6NNT2 1141 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 MAN1A2O60476 641 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 FGFR2P21802 821 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CYTH1Q15438 398 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 MGAT5BQ3V5L5 792 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CBWD2Q8IUF1 395 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CCNJLQ8IV13 435 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 NUP93Q8N1F7 819 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 CCDC134Q9H6E4 229 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 ASMTLO95671 621 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 SEC24CP53992 1094 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 EME1Q96AY2 570 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 SEMA6BQ9H3T3 888 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 RIC8BQ9NVN3 520 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 GID8Q9NWU2 228 aa17.21■□□□□ 0.35
PCDHA1-203ENST00000504120 ADGRB2O60241 1585 aa17.21■□□□□ 0.34
PCDHA1-203ENST00000504120 GTPBP10A4D1E9 387 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 HSPA1AP0DMV8 641 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 HSPA1BP0DMV9 641 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 VDRP11473 427 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 ARHGEF7Q14155 803 aa17.2■□□□□ 0.34
PCDHA1-203ENST00000504120 CHI3L2Q15782 390 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms