RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF571Q7Z3V5 609 aaPredicted RBP21.69■■□□□ 1.06
CDC42SE2-206ENST00000503291 FBXO22Q8NEZ5 403 aa21.69■■□□□ 1.06
CDC42SE2-206ENST00000503291 SLC20A1Q8WUM9 679 aa21.69■■□□□ 1.06
CDC42SE2-206ENST00000503291 DDX1Q92499 740 aaKnown RBP21.69■■□□□ 1.06
CDC42SE2-206ENST00000503291 BAG1Q99933 345 aaPredicted RBP21.69■■□□□ 1.06
CDC42SE2-206ENST00000503291 ZBP1Q9H171 429 aa21.69■■□□□ 1.06
CDC42SE2-206ENST00000503291 A0A1W2PPC1 479 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 CTSAP10619 480 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 DNAJB1P25685 340 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 TSPY1Q01534 308 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 UBE3AQ05086 875 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 SGO2Q562F6 1265 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 TAF3Q5VWG9 929 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 TMC7Q7Z402 723 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 LRRTM3Q86VH5 581 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 AUTS2Q8WXX7 1259 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 TIFAQ96CG3 184 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 CYFIP2Q96F07 1278 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 MRPL17Q9NRX2 175 aaKnown RBP21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 FAM49BQ9NUQ9 324 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 MTRRQ9UBK8 725 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 BACE2Q9Y5Z0 518 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 OR6C75A6NL08 312 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 GRM6O15303 877 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 CDR1P51861 262 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 ERVFC1P60507 584 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 MDH1BQ5I0G3 518 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 FAM171BQ6P995 826 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 TMEM139Q8IV31 216 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 MYCBPAPQ8TBZ2 947 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 ARNTL2Q8WYA1 636 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 OXCT2Q9BYC2 517 aaPredicted RBP21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 ZCWPW1Q9H0M4 648 aa21.68■■□□□ 1.06
CDC42SE2-206ENST00000503291 H3BNC9 293 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 MMEP08473 750 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 OR4Q2P0C623 313 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 RPL17P18621 184 aaKnown RBP21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 SSTR3P32745 418 aaPredicted RBP21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CDR2Q01850 454 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 GPM6BQ13491 265 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 LRIT3Q3SXY7 679 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 PPP1R26Q5T8A7 1209 aaPredicted RBP21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CYP26C1Q6V0L0 522 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 PKMYT1Q99640 499 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 AGPAT1Q99943 283 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 SYT11Q9BT88 431 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 NHEJ1Q9H9Q4 299 aaPredicted RBP21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CDY1Q9Y6F8 540 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 LILRB3O75022 631 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CCDC130P13994 396 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CHRNB2P17787 502 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 EIF4A3P38919 411 aaKnown RBP21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CNGA2Q16280 664 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 ZNF677Q86XU0 584 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 TMTC1Q8IUR5 882 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 GPR65Q8IYL9 337 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 PCED1BQ96HM7 432 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 TCF25Q9BQ70 676 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 CLSTN3Q9BQT9 956 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 TLR9Q9NR96 1032 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 TMLHEQ9NVH6 421 aa21.67■■□□□ 1.06
CDC42SE2-206ENST00000503291 O00370 1275 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 MED7O43513 233 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 CXCL14O95715 111 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 CFHP08603 1231 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 ARPP19P56211 112 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 CAMK1Q14012 370 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 PTPN14Q15678 1187 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 ARHGAP17Q68EM7 881 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 SLC8B1Q6J4K2 584 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 DCP1BQ8IZD4 617 aaKnown RBP21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 SLC2A14Q8TDB8 520 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 ZNF830Q96NB3 372 aaPredicted RBP21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 SSX2IPQ9Y2D8 614 aa21.66■■□□□ 1.06
CDC42SE2-206ENST00000503291 SSU72P8A0A1W2PR75 194 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 ADAM12O43184 909 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 CSPG5O95196 566 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 TNFAIP3P21580 790 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 FMO1Q01740 532 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 MAPK8IP2Q13387 824 aaPredicted RBP21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 MAPRE1Q15691 268 aaKnown RBP21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 GLYCTKQ8IVS8 523 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 FUKQ8N0W3 1084 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 CCDC42Q96M95 316 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 B3GNT5Q9BYG0 378 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 PDCL3Q9H2J4 239 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 ENTPD7Q9NQZ7 604 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 TSPAN16Q9UKR8 245 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 SOWAHDA6NJG2 315 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 OR1D2P34982 312 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 CA8P35219 290 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 CYP27A1Q02318 531 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 BMS1Q14692 1282 aaKnown RBP21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 SLC39A12Q504Y0 691 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 LCLAT1Q6UWP7 414 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 CCDC112Q8NEF3 446 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 MICAL1Q8TDZ2 1067 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 HNRNPABQ99729 332 aaKnown RBP21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms