RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 FOXD2O60548 495 aaPredicted RBP7.55□□□□□ -1.2
NEDD4-203ENST00000502612 RECQL4O94761 1208 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 IQCB1Q15051 598 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 GRAMD1BQ3KR37 738 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 USP39Q53GS9 565 aaKnown RBP7.55□□□□□ -1.2
NEDD4-203ENST00000502612 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 GORABQ5T7V8 394 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 RNF44Q7L0R7 432 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 TXLNBQ8N3L3 684 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 TTC9BQ8N6N2 239 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 ENAHQ8N8S7 591 aaPredicted RBP7.55□□□□□ -1.2
NEDD4-203ENST00000502612 BRI3BPQ8WY22 251 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 ADAM2Q99965 735 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 HEPHQ9BQS7 1158 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 SLC46A2Q9BY10 475 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 RNF181Q9P0P0 153 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 ZNF212Q9UDV6 495 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 KCNE5Q9UJ90 142 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 MAN2B2Q9Y2E5 1009 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 MRPS17Q9Y2R5 130 aaKnown RBP7.55□□□□□ -1.2
NEDD4-203ENST00000502612 UNC13AQ9UPW8 1703 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 TOP2AP11388 1531 aaKnown RBP7.54□□□□□ -1.2
NEDD4-203ENST00000502612 LOC102724159A0A0B4J2E5 919 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 NDUFA10O95299 355 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 WNT3P56703 355 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 BTKQ06187 659 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 TRIM14Q14142 442 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 PWP2Q15269 919 aaKnown RBP7.54□□□□□ -1.2
NEDD4-203ENST00000502612 CYP2A13Q16696 494 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 TMEM108Q6UXF1 575 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 C1orf210Q8IVY1 113 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 SMC5Q8IY18 1101 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 ADGRG5Q8IZF4 528 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 CPEB3Q8NE35 698 aaKnown RBP7.54□□□□□ -1.2
NEDD4-203ENST00000502612 MED15Q96RN5 788 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 PPCSQ9HAB8 311 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 SERHLQ9NQF3 203 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 WIZO95785 1651 aa7.54□□□□□ -1.2
NEDD4-203ENST00000502612 PRAMEF33A0A0G2JMD5 474 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 UNC119BA6NIH7 251 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 RNASET2O00584 256 aaKnown RBP7.53□□□□□ -1.2
NEDD4-203ENST00000502612 THAP12O43422 761 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 PRAMEF10O60809 474 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 NDST3O95803 873 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 C1SP09871 688 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 ATXN1LP0C7T5 689 aaKnown RBP7.53□□□□□ -1.2
NEDD4-203ENST00000502612 EEF1GP26641 437 aaKnown RBP7.53□□□□□ -1.2
NEDD4-203ENST00000502612 ACVR2AP27037 513 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 IL1R2P27930 398 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 ANXA11P50995 505 aaKnown RBP7.53□□□□□ -1.2
NEDD4-203ENST00000502612 ITGA8P53708 1063 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 KRT17Q04695 432 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 RESTQ13127 1097 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 FZD5Q13467 585 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 CLNKQ7Z7G1 428 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 GAS2L3Q86XJ1 694 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.53□□□□□ -1.2
NEDD4-203ENST00000502612 ALOXE3Q9BYJ1 711 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 KRTAP9-2Q9BYQ4 174 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 MYH16Q9H6N6 1097 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 LRCH1Q9Y2L9 728 aa7.53□□□□□ -1.2
NEDD4-203ENST00000502612 BICRAQ9NZM4 1560 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 A0A087WV62 115 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 A0A1W2PS29 197 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 TCEA3O75764 348 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 A1BGP04217 495 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 ZNF20P17024 532 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 BTF3P20290 206 aaKnown RBP7.52□□□□□ -1.21
NEDD4-203ENST00000502612 LOXL3P58215 753 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 TNFAIP2Q03169 654 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 DYRK1AQ13627 763 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 PREPLQ4J6C6 727 aaPredicted RBP7.52□□□□□ -1.21
NEDD4-203ENST00000502612 VPS53Q5VIR6 699 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 FCRL6Q6DN72 434 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 GGT6Q6P531 493 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 CERS3Q8IU89 383 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 ZNF276Q8N554 614 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 ZNF566Q969W8 418 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 RAPGEFL1Q9UHV5 662 aa7.52□□□□□ -1.21
NEDD4-203ENST00000502612 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 FAM234BA2RU67 622 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 CLCA1A8K7I4 914 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 LPXNO60711 386 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 NBNO60934 754 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 EIF3JO75822 258 aaKnown RBP7.51□□□□□ -1.21
NEDD4-203ENST00000502612 MYL4P12829 197 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 ITGALP20701 1170 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 TECP42680 631 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 MAGEA10P43363 369 aaPredicted RBP7.51□□□□□ -1.21
NEDD4-203ENST00000502612 NPTX2P47972 431 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 PTDSS1P48651 473 aaKnown RBP7.51□□□□□ -1.21
NEDD4-203ENST00000502612 PXNP49023 591 aaPredicted RBP7.51□□□□□ -1.21
NEDD4-203ENST00000502612 NDUFV1P49821 464 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 DGCR2P98153 550 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 SLC29A2Q14542 456 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 STARD3Q14849 445 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 NRN1LQ496H8 165 aa7.51□□□□□ -1.21
NEDD4-203ENST00000502612 CACHD1Q5VU97 1274 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms