RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 WDR6Q9NNW5 1121 aaKnown RBP17.9■□□□□ 0.46
PRKCB-210ENST00000498739 CRTAC1Q9NQ79 661 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 SAMSN1Q9NSI8 373 aaKnown RBP17.9■□□□□ 0.46
PRKCB-210ENST00000498739 HCFC1R1Q9NWW0 138 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 HSFX1Q9UBD0 423 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 NFE2L3Q9Y4A8 694 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 CLUHO75153 1309 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 BRWD1Q9NSI6 2320 aa17.89■□□□□ 0.46
PRKCB-210ENST00000498739 P4HA2O15460 535 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 CD58P19256 250 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 ALDH1A3P47895 512 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 TUFMP49411 452 aaKnown RBP17.89■□□□□ 0.45
PRKCB-210ENST00000498739 NTHL1P78549 312 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 ZP2Q05996 745 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 LRMPQ12912 555 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 MAPRE1Q15691 268 aaKnown RBP17.89■□□□□ 0.45
PRKCB-210ENST00000498739 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.45
PRKCB-210ENST00000498739 MDH1BQ5I0G3 518 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 FAM171BQ6P995 826 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 C4orf50Q6ZRC1 276 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 TATDN2Q93075 761 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 MYLPFQ96A32 169 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 LPIN3Q9BQK8 851 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 CYP3A43Q9HB55 503 aa17.89■□□□□ 0.45
PRKCB-210ENST00000498739 DNMT3BQ9UBC3 853 aaKnown RBP17.89■□□□□ 0.45
PRKCB-210ENST00000498739 PMM2O15305 246 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 HAPLN1P10915 354 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 PTPN1P18031 435 aaKnown RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 SSTR3P32745 418 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 NDST1P52848 882 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 EPHB3P54753 998 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 CYP27A1Q02318 531 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 ORC1Q13415 861 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 IQCEQ6IPM2 695 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 GET4Q7L5D6 327 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 MYCBPAPQ8TBZ2 947 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 FAM200AQ8TCP9 573 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 ZNF512Q96ME7 567 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 CORO1BQ9BR76 489 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 CEP72Q9P209 647 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 HMGXB4Q9UGU5 601 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 NR2E1Q9Y466 385 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 UNC80Q8N2C7 3258 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 C2orf16Q68DN1 1984 aa17.88■□□□□ 0.45
PRKCB-210ENST00000498739 TCF20Q9UGU0 1960 aaKnown RBP17.88■□□□□ 0.45
PRKCB-210ENST00000498739 SYCE3A1L190 88 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 KCNJ18B7U540 433 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 PTPN2P17706 415 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 ATF6P18850 670 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 FSHRP23945 695 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 CYP2F1P24903 491 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 KCNJ12Q14500 433 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 MAN2A1Q16706 1144 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 ANO6Q4KMQ2 910 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 PABPC1LQ4VXU2 614 aaKnown RBP17.87■□□□□ 0.45
PRKCB-210ENST00000498739 ACOT1Q86TX2 421 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 UNC93AQ86WB7 457 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 B3GALNT2Q8NCR0 500 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 PCED1BQ96HM7 432 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRKCB-210ENST00000498739 FAXDC2Q96IV6 333 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 TNIP3Q96KP6 325 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 ARID3AQ99856 593 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 COL25A1Q9BXS0 654 aaPredicted RBP17.87■□□□□ 0.45
PRKCB-210ENST00000498739 ABCB6Q9NP58 842 aa17.87■□□□□ 0.45
PRKCB-210ENST00000498739 C2CD4DB7Z1M9 353 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 LOC730098B7Z3J9 87 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 RHOP08100 348 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 PRKCSHP14314 528 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-210ENST00000498739 TRIM21P19474 475 aaKnown RBP17.86■□□□□ 0.45
PRKCB-210ENST00000498739 GBP2P32456 591 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-210ENST00000498739 GPR15P49685 360 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 MYL5Q02045 173 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 INCA1Q0VD86 236 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 CUL2Q13617 745 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 VEPH1Q14D04 833 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 CFAP221Q4G0U5 840 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 SCN4BQ8IWT1 228 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 HS6ST3Q8IZP7 471 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 GJD3Q8N144 294 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 TDRD5Q8NAT2 981 aaKnown RBP17.86■□□□□ 0.45
PRKCB-210ENST00000498739 EHBP1Q8NDI1 1231 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 GIPC2Q8TF65 315 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 NT5C1BQ96P26 610 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 TUBGCP2Q9BSJ2 902 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 NAT10Q9H0A0 1025 aaKnown RBP17.86■□□□□ 0.45
PRKCB-210ENST00000498739 GCNT4Q9P109 453 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 DENND4AQ7Z401 1863 aa17.86■□□□□ 0.45
PRKCB-210ENST00000498739 C19orf67A6NJJ6 358 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 CILPO75339 1184 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 BDNFP23560 247 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 EEF1GP26641 437 aaKnown RBP17.85■□□□□ 0.45
PRKCB-210ENST00000498739 RPL10AP62906 217 aaKnown RBP17.85■□□□□ 0.45
PRKCB-210ENST00000498739 DDR2Q16832 855 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 TCP11X2Q5H9J9 407 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 PDZD4Q76G19 769 aaPredicted RBP17.85■□□□□ 0.45
PRKCB-210ENST00000498739 OTOP3Q7RTS5 596 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 ITIH5Q86UX2 942 aa17.85■□□□□ 0.45
PRKCB-210ENST00000498739 AOPEPQ8N6M6 819 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms