RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 C7orf26Q96N11 449 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 SPATA5L1Q9BVQ7 753 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 LSM14BQ9BX40 385 aaKnown RBP9.38□□□□□ -0.91
SNX13-212ENST00000498463 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
SNX13-212ENST00000498463 PGPEP1LA6NFU8 196 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
SNX13-212ENST00000498463 ZBED4O75132 1171 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 ANXA1P04083 346 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 JUNP05412 331 aaKnown RBP9.37□□□□□ -0.91
SNX13-212ENST00000498463 VSIG10L2P0DP72 767 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 TPH1P17752 444 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 CLNS1AP54105 237 aaKnown RBP9.37□□□□□ -0.91
SNX13-212ENST00000498463 ATXN1P54253 815 aaKnown RBP9.37□□□□□ -0.91
SNX13-212ENST00000498463 BCAT1P54687 386 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 MLLT6P55198 1093 aaPredicted RBP9.37□□□□□ -0.91
SNX13-212ENST00000498463 CASP6P55212 293 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 KRT32Q14532 448 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 GALNT5Q7Z7M9 940 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 TTLL6Q8N841 843 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 DNERQ8NFT8 737 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 OR6Y1Q8NGX8 325 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 CEP70Q8NHQ1 597 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 CPT1CQ8TCG5 803 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 ST8SIA4Q92187 359 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 LPPQ93052 612 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 SCAMP4Q969E2 229 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 TRAPPC9Q96Q05 1148 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 GPR63Q9BZJ6 419 aa9.37□□□□□ -0.91
SNX13-212ENST00000498463 CCP110O43303 1012 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 RTN3O95197 1032 aaPredicted RBP9.36□□□□□ -0.91
SNX13-212ENST00000498463 SPINK2P20155 84 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 MAN2A2P49641 1150 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 NCKAP1LP55160 1127 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 WNT3P56703 355 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 NPY5RQ15761 445 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 ATPAF1Q5TC12 328 aaPredicted RBP9.36□□□□□ -0.91
SNX13-212ENST00000498463 KRT40Q6A162 431 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 RRAGAQ7L523 313 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 OR5M3Q8NGP4 307 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 TDRD7Q8NHU6 1098 aaKnown RBP9.36□□□□□ -0.91
SNX13-212ENST00000498463 SLC35B2Q8TB61 432 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 KIRREL1Q96J84 757 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 PAIP1Q9H074 479 aaKnown RBP9.36□□□□□ -0.91
SNX13-212ENST00000498463 EPS8L2Q9H6S3 715 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 DAPP1Q9UN19 280 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 GPR34Q9UPC5 381 aa9.36□□□□□ -0.91
SNX13-212ENST00000498463 USO1O60763 962 aaKnown RBP9.35□□□□□ -0.91
SNX13-212ENST00000498463 NTSR2O95665 410 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 HNRNPA1P09651 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNX13-212ENST00000498463 PTDSS1P48651 473 aaKnown RBP9.35□□□□□ -0.91
SNX13-212ENST00000498463 BPIFB4P59827 614 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 LRP8Q14114 963 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 KCNAB1Q14722 419 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 CCNG2Q16589 344 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 MEA1Q16626 185 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 ZNF792Q3KQV3 632 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 VWA3BQ502W6 1294 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 FYB2Q5VWT5 728 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 FAM205BPQ63HN1 556 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 BBS12Q6ZW61 710 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 SP8Q8IXZ3 490 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 LINC00482Q8N8I6 264 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 FAM46DQ8NEK8 389 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 RSC1A1Q92681 617 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 NOX5Q96PH1 765 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 RNPEPQ9H4A4 650 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 XPNPEP3Q9NQH7 507 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
SNX13-212ENST00000498463 DKK4Q9UBT3 224 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 ATP11BQ9Y2G3 1177 aa9.35□□□□□ -0.91
SNX13-212ENST00000498463 SASH1O94885 1247 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 CHEK2O96017 543 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 VIPR2P41587 438 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 GZMKP49863 264 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 DRG2P55039 364 aaKnown RBP9.34□□□□□ -0.91
SNX13-212ENST00000498463 PLA1AQ53H76 456 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 SLC9C2Q5TAH2 1124 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 UTP14CQ5TAP6 766 aaKnown RBP9.34□□□□□ -0.91
SNX13-212ENST00000498463 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 HAUS3Q68CZ6 603 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 RAB11FIP2Q7L804 512 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 TMEM57Q8N5G2 664 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 AGBL5Q8NDL9 886 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 TMIEQ8NEW7 156 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 SMCR8Q8TEV9 937 aaPredicted RBP9.34□□□□□ -0.91
SNX13-212ENST00000498463 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 SDF4Q9BRK5 362 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 SIK2Q9H0K1 926 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 ZBTB26Q9HCK0 441 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 ANKEF1Q9NU02 776 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 NSMCE4AQ9NXX6 385 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 PI4KBQ9UBF8 816 aa9.34□□□□□ -0.91
SNX13-212ENST00000498463 NOL7Q9UMY1 257 aaKnown RBP9.34□□□□□ -0.91
SNX13-212ENST00000498463 A0A1W2PRQ8 180 aa9.33□□□□□ -0.92
SNX13-212ENST00000498463 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
SNX13-212ENST00000498463 COQ9O75208 318 aa9.33□□□□□ -0.92
SNX13-212ENST00000498463 TIPRLO75663 272 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms