RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PSMC1P62191 440 aaKnown RBP19.7■□□□□ 0.74
HOXD11-202ENST00000498438 TNNC1P63316 161 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 DLG4P78352 724 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 CLDN10P78369 228 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 WDR72Q3MJ13 1102 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 SMYD4Q8IYR2 804 aaPredicted RBP19.7■□□□□ 0.74
HOXD11-202ENST00000498438 XYLT2Q9H1B5 865 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 ABCB6Q9NP58 842 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 FRMD4BQ9Y2L6 1034 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 COL4A3Q01955 1670 aa19.7■□□□□ 0.74
HOXD11-202ENST00000498438 NUP210Q8TEM1 1887 aaPredicted RBP19.69■□□□□ 0.74
HOXD11-202ENST00000498438 PTPRDP23468 1912 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 MYBPHLA2RUH7 354 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 STK25O00506 426 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 PI15O43692 258 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 ATP2C2O75185 946 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 STAU1O95793 577 aaKnown RBP19.69■□□□□ 0.74
HOXD11-202ENST00000498438 NR2F2P24468 414 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 CYP2F1P24903 491 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 ATICP31939 592 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 VIPR2P41587 438 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 AP3M2P53677 418 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 PTPN5P54829 565 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 NHLH1Q02575 133 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 TCF15Q12870 199 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 GRM2Q14416 872 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 TAF12Q16514 161 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 NFIL3Q16649 462 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 SDHAF4Q5VUM1 108 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 SPATA2LQ8IUW3 424 aaPredicted RBP19.69■□□□□ 0.74
HOXD11-202ENST00000498438 STKLD1Q8NE28 680 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 SYAP1Q96A49 352 aaPredicted RBP19.69■□□□□ 0.74
HOXD11-202ENST00000498438 MRPL45Q9BRJ2 306 aaKnown RBP19.69■□□□□ 0.74
HOXD11-202ENST00000498438 GPR88Q9GZN0 384 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 ATXN3LQ9H3M9 355 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 TRPV4Q9HBA0 871 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 IL21Q9HBE4 155 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 CDH9Q9ULB4 789 aa19.69■□□□□ 0.74
HOXD11-202ENST00000498438 GALR2O43603 387 aaPredicted RBP19.68■□□□□ 0.74
HOXD11-202ENST00000498438 TACC1O75410 805 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 CLSTN1O94985 981 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 C4BPAP04003 597 aaKnown RBP19.68■□□□□ 0.74
HOXD11-202ENST00000498438 PDGFRBP09619 1106 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 CDC25CP30307 473 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 NUBP1P53384 320 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 CYP4F8P98187 520 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 PFKPQ01813 784 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 ZNF699Q32M78 642 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 CFAP221Q4G0U5 840 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 ARHGAP15Q53QZ3 475 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 FAM171BQ6P995 826 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 VITQ6UXI7 678 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 TMC2Q8TDI7 906 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 MYLPFQ96A32 169 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 GCNAQ96QF7 691 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 MKNK1Q9BUB5 465 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 SNX25Q9H3E2 840 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 CRTAC1Q9NQ79 661 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 NXF1Q9UBU9 619 aaKnown RBP19.68■□□□□ 0.74
HOXD11-202ENST00000498438 OBSL1O75147 1896 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 NCANO14594 1321 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 DENND4CQ5VZ89 1909 aa19.68■□□□□ 0.74
HOXD11-202ENST00000498438 MAPK13O15264 365 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 AKAP3O75969 853 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 VNN1O95497 513 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 HMGA1P17096 107 aaKnown RBP19.67■□□□□ 0.74
HOXD11-202ENST00000498438 RPL10AP62906 217 aaKnown RBP19.67■□□□□ 0.74
HOXD11-202ENST00000498438 NCOA4Q13772 614 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 MLF2Q15773 248 aaPredicted RBP19.67■□□□□ 0.74
HOXD11-202ENST00000498438 DDR2Q16832 855 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 ZCWPW2Q504Y3 356 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 SLC44A4Q53GD3 710 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 GPR158Q5T848 1215 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 PHLDB3Q6NSJ2 640 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 C4orf50Q6ZRC1 276 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 ERCC4Q92889 916 aaPredicted RBP19.67■□□□□ 0.74
HOXD11-202ENST00000498438 FUBP3Q96I24 572 aaKnown RBP eCLIP19.67■□□□□ 0.74
HOXD11-202ENST00000498438 VRTNQ9H8Y1 702 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 RMND1Q9NWS8 449 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 CIZ1Q9ULV3 898 aaPredicted RBP19.67■□□□□ 0.74
HOXD11-202ENST00000498438 NME7Q9Y5B8 376 aa19.67■□□□□ 0.74
HOXD11-202ENST00000498438 PIEZO1Q92508 2521 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 COL4A2P08572 1712 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 CSH1P0DML2 217 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 CSH2P0DML3 217 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 PSMC3P17980 439 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 GNL1P36915 607 aaPredicted RBP19.66■□□□□ 0.74
HOXD11-202ENST00000498438 STARD6P59095 220 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 C1orf220Q5T0J3 134 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 SCARA5Q6ZMJ2 495 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 OR6B3Q8NGW1 331 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 DEPDC1BQ8WUY9 529 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 ELMO3Q96BJ8 720 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 RSPRY1Q96DX4 576 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 SHDQ96IW2 340 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 TIGD1Q96MW7 591 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 GSDMAQ96QA5 445 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 TRMT61BQ9BVS5 477 aaKnown RBP19.66■□□□□ 0.74
HOXD11-202ENST00000498438 FOXQ1Q9C009 403 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 SMYD3Q9H7B4 428 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms