RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 MEIS3P2A8K0S8 358 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GOLGA8SH3BPF8 625 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 PIRO00625 290 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 MGEA5O60502 916 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 ERLIN1O75477 346 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GJB6O95452 261 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 CKBP12277 381 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 MCM3P25205 808 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 LRPAP1P30533 357 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 MAN1A1P33908 653 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GJC1P36383 396 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 SCNN1GP51170 649 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GSCP56915 257 aaPredicted RBP8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 TAP1Q03518 808 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GRIK3Q13003 919 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 PDCLQ13371 301 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 ZNF211Q13398 564 aaPredicted RBP8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 CLUL1Q15846 466 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 ZNF618Q5T7W0 954 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 LHX8Q68G74 356 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 PLEKHA7Q6IQ23 1121 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 TMCO3Q6UWJ1 677 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 ERICH1Q86X53 443 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 CPNE8Q86YQ8 564 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 RASGEF1CQ8N431 466 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 RNF169Q8NCN4 708 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 C3orf20Q8ND61 904 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 APPL2Q8NEU8 664 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 OR6B3Q8NGW1 331 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 KRT35Q92764 455 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GAD1Q99259 594 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 NAP1L3Q99457 506 aaPredicted RBP8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 PLVAPQ9BX97 442 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 TRIM7Q9C029 511 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 UNC93B1Q9H1C4 597 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 LHX5Q9H2C1 402 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 SNX25Q9H3E2 840 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 RSAD1Q9HA92 442 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 FAM49BQ9NUQ9 324 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 PARVAQ9NVD7 372 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 LCMT1Q9UIC8 334 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 TSPAN16Q9UKR8 245 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 GIT1Q9Y2X7 761 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 ALG6Q9Y672 507 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 SQORQ9Y6N5 450 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 COL4A4P53420 1690 aaPredicted RBP8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 DENND4CQ5VZ89 1909 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 CASTOR2A6NHX0 329 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 A8MXQ7 604 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 KPNA7A9QM74 516 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 CCDC188H7C350 402 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 MYO1FO00160 1098 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 ARVCFO00192 962 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 DNM1LO00429 736 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 PODXLO00592 558 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 PSTPIP1O43586 416 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 HUS1O60921 280 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 PROSCO94903 275 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 FGGP02679 453 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 THP07101 528 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 TUBBP07437 444 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 SETSIPP0DME0 302 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 SKIP12755 728 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 HSPA6P17066 643 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 SLC1A1P43005 524 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 RNASE9P60153 205 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 VSNL1P62760 191 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 MAMLD1Q13495 774 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 DSC3Q14574 896 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 BRD3Q15059 726 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 DCUN1D2Q6PH85 259 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 ACOT1Q86TX2 421 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 FEZF2Q8TBJ5 459 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 UBE2Q2Q8WVN8 375 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 KBTBD7Q8WVZ9 684 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 ALG3Q92685 438 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 CD101Q93033 1021 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 PGBD4Q96DM1 585 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 KRT12Q99456 494 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 ADAM2Q99965 735 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 PARD6BQ9BYG5 372 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 MIS12Q9H081 205 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 TRPV6Q9H1D0 765 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 GDAP2Q9NXN4 497 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 WDR35Q9P2L0 1181 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 HESX1Q9UBX0 185 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 RAB21Q9UL25 225 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 L1RE1Q9UN81 338 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 USTQ9Y2C2 406 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 INPP5FQ9Y2H2 1132 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 HELZP42694 1942 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 PCNTO95613 3336 aa8.54□□□□□ -1.04
PDZRN3-212ENST00000498048 DOCK4Q8N1I0 1966 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms