RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 HSFX1Q9UBD0 423 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 DOCK8Q8NF50 2099 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 CLUHO75153 1309 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 NOTCH4Q99466 2003 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 CCL16O15467 120 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 STX10O60499 249 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 XYLBO75191 536 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 TACC1O75410 805 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 ASS1P00966 412 aaKnown RBP12.04□□□□□ -0.48
ERCC8-208ENST00000497892 LRG1P02750 347 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 WARSP23381 471 aaKnown RBP12.04□□□□□ -0.48
ERCC8-208ENST00000497892 PIK3CAP42336 1068 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 LHX1P48742 406 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 MYL7Q01449 175 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 TSPY1Q01534 308 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 SMARCB1Q12824 385 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 SLC39A12Q504Y0 691 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 RBM43Q6ZSC3 357 aaKnown RBP12.04□□□□□ -0.48
ERCC8-208ENST00000497892 OSTM1Q86WC4 334 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 MLKLQ8NB16 471 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 TAS1R2Q8TE23 839 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 C2orf15Q8WU43 125 aaKnown RBP12.04□□□□□ -0.48
ERCC8-208ENST00000497892 TAF4BQ92750 862 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 RPGRIP1Q96KN7 1286 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 MMS19Q96T76 1030 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 PKMYT1Q99640 499 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 ACBD6Q9BR61 282 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 CRISPLD1Q9H336 500 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 PIDD1Q9HB75 910 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 TMEM8AQ9HCN3 771 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 ARMCX3Q9UH62 379 aaPredicted RBP12.04□□□□□ -0.48
ERCC8-208ENST00000497892 RWDD2AQ9UIY3 292 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 USTQ9Y2C2 406 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 NR2E1Q9Y466 385 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 YIPF1Q9Y548 306 aa12.04□□□□□ -0.48
ERCC8-208ENST00000497892 PTPRDP23468 1912 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 TNFRSF10AO00220 468 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 DLL1O00548 723 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 HCRTO43612 131 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 ACAT1P24752 427 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 PCSK1P29120 753 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 SSTR3P32745 418 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 MXI1P50539 228 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 STX17P56962 302 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 DUSP4Q13115 394 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 NFE2Q16621 373 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 SGSM1Q2NKQ1 1148 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 DCAF17Q5H9S7 520 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 ZNF667Q5HYK9 610 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 KRT39Q6A163 491 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 GRASPQ7Z6J2 395 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 FILIP1Q7Z7B0 1213 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 LRRTM3Q86VH5 581 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 DCP1BQ8IZD4 617 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 TTC9BQ8N6N2 239 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 TDRD5Q8NAT2 981 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 ATAD1Q8NBU5 361 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 MRPL45Q9BRJ2 306 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 IMPG2Q9BZV3 1241 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 MMRN2Q9H8L6 949 aa12.03□□□□□ -0.48
ERCC8-208ENST00000497892 METTL14Q9HCE5 456 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
ERCC8-208ENST00000497892 RCCD1A6NED2 376 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 C2CD4DB7Z1M9 353 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 CLSTN1O94985 981 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
ERCC8-208ENST00000497892 ASPAP45381 313 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
ERCC8-208ENST00000497892 NOP14P78316 857 aaKnown RBP12.02□□□□□ -0.49
ERCC8-208ENST00000497892 TWF1Q12792 350 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 PLD1Q13393 1074 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 TCERG1LQ5VWI1 586 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 OTOP3Q7RTS5 596 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 FBXL13Q8NEE6 735 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 SPPL2BQ8TCT7 592 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 MED15Q96RN5 788 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 SYT15Q9BQS2 421 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 ABCB6Q9NP58 842 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 TMLHEQ9NVH6 421 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 CDH9Q9ULB4 789 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 NME7Q9Y5B8 376 aa12.02□□□□□ -0.49
ERCC8-208ENST00000497892 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 GNA14O95837 355 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 P4HA1P13674 534 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 FSHRP23945 695 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 LMO2P25791 158 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 NLRP12P59046 1061 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 PSMC1P62191 440 aaKnown RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 NTHL1P78549 312 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CCDC142Q17RM4 750 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CFAP221Q4G0U5 840 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms