RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 FAM171BQ6P995 826 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 SV2AQ7L0J3 742 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 DNAJB7Q7Z6W7 309 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 TMC8Q8IU68 726 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ELMOD1Q8N336 334 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 SPPL2BQ8TCT7 592 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 FGF14Q92915 247 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 DUSP12Q9UNI6 340 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 NUMBLQ9Y6R0 609 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 MYO10Q9HD67 2058 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 MYBPHLA2RUH7 354 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ZNF197O14709 1029 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 NARSO43776 548 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ATP2C2O75185 946 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 TACC1O75410 805 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 PCSK1P29120 753 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 PSMC2P35998 433 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 VAMP7P51809 220 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 EPHB3P54753 998 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 MYL7Q01449 175 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 TSPY1Q01534 308 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ENPEPQ07075 957 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 TRPC3Q13507 836 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 NCOA4Q13772 614 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 MGAT5BQ3V5L5 792 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 CYP4A22Q5TCH4 519 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 PDZD4Q76G19 769 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 PSMG2Q969U7 264 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ELMO3Q96BJ8 720 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 MCRS1Q96EZ8 462 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ZNF334Q9HCZ1 680 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 ASB3Q9Y575 518 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 PCDHB5Q9Y5E4 795 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 DOCK8Q8NF50 2099 aa17.09■□□□□ 0.33
CTDSP1-214ENST00000497677 BIN1O00499 593 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 PHACTR2O75167 634 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 PDGFBP01127 241 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 COL9A1P20849 921 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 PPP3CAQ08209 521 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 BIRC3Q13489 604 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 IQCB1Q15051 598 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ISM2Q6H9L7 571 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 INTS8Q75QN2 995 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 GAREM2Q75VX8 874 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ZSWIM3Q96MP5 696 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 LPIN3Q9BQK8 851 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 CRTAC1Q9NQ79 661 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ASAH2Q9NR71 780 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 ABI2Q9NYB9 513 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 RAPGEFL1Q9UHV5 662 aa17.08■□□□□ 0.32
CTDSP1-214ENST00000497677 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 MYL4P12829 197 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 GJA1P17302 382 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 GPR15P49685 360 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 MKNK1Q9BUB5 465 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 IL21Q9HBE4 155 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 TSC2P49815 1807 aa17.07■□□□□ 0.32
CTDSP1-214ENST00000497677 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 SRFP11831 508 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 HMGA1P17096 107 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 FCARP24071 287 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 CYP2F1P24903 491 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 GNL1P36915 607 aaPredicted RBP17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 GCLMP48507 274 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 PSMC1P62191 440 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 TNNC1P63316 161 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 TEAD2Q15562 447 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 SGSM1Q2NKQ1 1148 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 ZNF699Q32M78 642 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 FAM78AQ5JUQ0 283 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
CTDSP1-214ENST00000497677 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms