RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	SORBS3	O60504	671 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SEC24D	O94855	1032 aa	Predicted RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RARB	P10826	455 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SP4	Q02446	784 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TCP10	Q12799	353 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SEPT6	Q14141	434 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	QRICH1	Q2TAL8	776 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EML3	Q32P44	896 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FAXC	Q5TGI0	409 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	KLHDC10	Q6PID8	442 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	AMIGO2	Q86SJ2	522 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ZNF34	Q8IZ26	560 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DGCR14	Q96DF8	476 aa	Known RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	HSFX1	Q9UBD0	423 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LGALS13	Q9UHV8	139 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ZNF510	Q9Y2H8	683 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NFAT5	O94916	1531 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ARFGEF2	Q9Y6D5	1785 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597		A8MXQ7	604 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EML1	O00423	815 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	AIM2	O14862	343 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SLC16A3	O15427	465 aa	Known RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SRGAP2C	P0DJJ0	459 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SRGAP2B	P0DMP2	458 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	UQCRB	P14927	111 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MFAP3	P55082	362 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NCKAP1L	P55160	1127 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TAS2R40	P59535	323 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	BST1	Q10588	318 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SIX1	Q15475	284 aa	Predicted RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ITPRIPL1	Q6GPH6	555 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	HPS6	Q86YV9	775 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SLFN12	Q8IYM2	578 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NEDD1	Q8NHV4	660 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NT5C1B	Q96P26	610 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CCT7	Q99832	543 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GTF3C4	Q9UKN8	822 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SH3GLB1	Q9Y371	365 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ZNF804B	A4D1E1	1349 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FRMPD4	Q14CM0	1322 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LAMB4	A4D0S4	1761 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SPEF2	Q9C093	1822 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TTLL13P	A6NNM8	815 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597		H3BSA7	217 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NDC80	O14777	642 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FSCN2	O14926	492 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TLR3	O15455	904 aa	Known RBP	11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FGR	P09769	529 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CYP11B1	P15538	503 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PDE1B	Q01064	536 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PLOD1	Q02809	727 aa	Predicted RBP	11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RHBDF2	Q6PJF5	856 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ACAD11	Q709F0	780 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NANOGNB	Q7Z5D8	188 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ATP11C	Q8NB49	1132 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GIPC3	Q8TF64	312 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MMP19	Q99542	508 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EBF4	Q9BQW3	602 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	WWP1	Q9H0M0	922 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ARMC7	Q9H6L4	198 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	IL1RAPL1	Q9NZN1	696 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SRP68	Q9UHB9	627 aa	Known RBP	11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TAGLN3	Q9UI15	199 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PCDHGB4	Q9UN71	923 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PCDHGB5	Q9Y5G0	923 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ARHGAP10	A1A4S6	786 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GAS7	O60861	476 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MX2	P20592	715 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	IVD	P26440	423 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TMED10	P49755	219 aa	Known RBP	11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SFSWAP	Q12872	951 aa	Known RBP	11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DNAL1	Q4LDG9	190 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	KRT80	Q6KB66	452 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PDIK1L	Q8N165	341 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LRRN4	Q8WUT4	740 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PAIP1	Q9H074	479 aa	Known RBP	11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597		Q9H521	79 aa		11.11	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PPP1R11	O60927	126 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CAMTA2	O94983	1202 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RFC1	P35251	1148 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CRKL	P46109	303 aa	Known RBP	11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MRPS22	P82650	360 aa	Known RBP	11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GK3P	Q14409	553 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NRF1	Q16656	503 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TMEM259	Q4ZIN3	620 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LIN9	Q5TKA1	542 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DENND1A	Q8TEH3	1009 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	E2F7	Q96AV8	911 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PTCD3	Q96EY7	689 aa	Known RBP	11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MAF1	Q9H063	256 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597		G3V3G9	751 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GLRA2	P23416	452 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FMO1	Q01740	532 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MTA1	Q13330	715 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	KCNT1	Q5JUK3	1230 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	C6orf52	Q5T4I8	152 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DCAF8	Q5TAQ9	597 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MROH9	Q5TGP6	573 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CASC4	Q6P4E1	433 aa		11.1	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ANKRD23	Q86SG2	305 aa		11.1	□□□□□ -0.63

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