RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 CHRNA3P32297 505 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 SSR1P43307 286 aaKnown RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 TAS2R40P59535 323 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 CBX1P83916 185 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 SOX4Q06945 474 aaPredicted RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 GPS2Q13227 327 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 PTK7Q13308 1070 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 ITGA7Q13683 1181 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 DHX34Q14147 1143 aaKnown RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 ZNF268Q14587 947 aaPredicted RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 SOWAHAQ2M3V2 549 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 XYLT1Q86Y38 959 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 KATNAL2Q8IYT4 538 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 EIF1ADQ8N9N8 165 aaKnown RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 OR6B3Q8NGW1 331 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 MAIP1Q8WWC4 291 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 IFT81Q8WYA0 676 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPN1-207ENST00000497289 MIS12Q9H081 205 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 NOD1Q9Y239 953 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 TDRD15B5MCY1 1934 aaKnown RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 SIGLEC16A6NMB1 481 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 BHMG1C9JSJ3 638 aaPredicted RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 TTI1O43156 1089 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 ERBB2P04626 1255 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 KRT3P12035 628 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 LRPAP1P30533 357 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 GABRB2P47870 512 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 CARSP49589 748 aaKnown RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 ACLYP53396 1101 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 DR1Q01658 176 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 ZNF252P-AS1Q0IIN9 211 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 NNTQ13423 1086 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 CUL1Q13616 776 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 GOLGA7BQ2TAP0 167 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 DAB2IPQ5VWQ8 1189 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 NIPA2Q8N8Q9 360 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 PRELID2Q8N945 189 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 CAVIN3Q969G5 261 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 PPP1R10Q96QC0 940 aaKnown RBP16.7■□□□□ 0.26
RPN1-207ENST00000497289 RAB17Q9H0T7 212 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 GOLGA2P5Q9HBQ8 144 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
RPN1-207ENST00000497289 FAM187AA6NFU0 413 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 PTGESO14684 152 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 FSCN2O14926 492 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.269e-8■■■■□ 20.5
RPN1-207ENST00000497289 ACOT1Q86TX2 421 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 UBA3Q8TBC4 463 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 TJP2Q9UDY2 1190 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 RASAL2Q9UJF2 1139 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 UTP11Q9Y3A2 253 aaKnown RBP16.69■□□□□ 0.26
RPN1-207ENST00000497289 MOXD2PA6NHM9 499 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 A8MXQ7 604 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 GJC1P36383 396 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 OGDHQ02218 1023 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 CCDC50Q8IVM0 306 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 C12orf50Q8NA57 414 aaPredicted RBP16.69■□□□□ 0.26
RPN1-207ENST00000497289 APPL2Q8NEU8 664 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 FNIP1Q8TF40 1166 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 MAGOHBQ96A72 148 aaKnown RBP16.69■□□□□ 0.26
RPN1-207ENST00000497289 GDAP1L1Q96MZ0 367 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 SNX25Q9H3E2 840 aa16.69■□□□□ 0.26
RPN1-207ENST00000497289 METTL5Q9NRN9 209 aaKnown RBP16.69■□□□□ 0.26
RPN1-207ENST00000497289 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.69■□□□□ 0.26
RPN1-207ENST00000497289 SPTLC1O15269 473 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 SETSIPP0DME0 302 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 RAB27AP51159 221 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 SMC1AQ14683 1233 aaKnown RBP16.68■□□□□ 0.26
RPN1-207ENST00000497289 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 SIX1Q15475 284 aaPredicted RBP16.68■□□□□ 0.26
RPN1-207ENST00000497289 PPP1R26Q5T8A7 1209 aaPredicted RBP16.68■□□□□ 0.26
RPN1-207ENST00000497289 LRRC38Q5VT99 294 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 C12orf29Q8N999 325 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 EXD1Q8NHP7 514 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 KBTBD7Q8WVZ9 684 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 ZFP42Q96MM3 310 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 AGO3Q9H9G7 860 aaKnown RBP16.68■□□□□ 0.26
RPN1-207ENST00000497289 FAM114A2Q9NRY5 505 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 HESX1Q9UBX0 185 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 PCYOX1Q9UHG3 505 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 HPCAL4Q9UM19 191 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 NME7Q9Y5B8 376 aa16.68■□□□□ 0.26
RPN1-207ENST00000497289 TCRBV7S2A1N4TA0A589 114 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 HUS1O60921 280 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 INHAP05111 366 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 RARAP10276 462 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 GHRP10912 638 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 PSMA2P25787 234 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 CD52P31358 61 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 MLH1P40692 756 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 CETN2P41208 172 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 FAM26DQ5JW98 314 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 ARHGAP17Q68EM7 881 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
RPN1-207ENST00000497289 TOP6BLQ8N6T0 577 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms