RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 ARMC4Q5T2S8 1044 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SFRP5Q5T4F7 317 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TTC22Q5TAA0 569 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MROH9Q5TGP6 573 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PRAMEF9Q5VWM5 478 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ATG16L1Q676U5 607 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SLFN12LQ6IEE8 588 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 NAA16Q6N069 864 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 INTS5Q6P9B9 1019 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 FBXO38Q6PIJ6 1188 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CPLX2Q6PUV4 134 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 KLHL17Q6TDP4 642 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ZPBP2Q6X784 338 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 Q6ZS46 218 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM47EQ6ZV65 393 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ACAD11Q709F0 780 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 USP49Q70CQ1 688 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 UBE2Q1Q7Z7E8 422 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 VSIG10LQ86VR7 867 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 IQCA1Q86XH1 822 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 GATAD2AQ86YP4 633 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 DMRTC2Q8IXT2 367 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 RBM12BQ8IXT5 1001 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ADSSL1Q8N142 457 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ZNF619Q8N2I2 560 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SH2D3CQ8N5H7 860 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CDYL2Q8N8U2 506 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 AVL9Q8NBF6 648 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 GALNT6Q8NCL4 622 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MSANTD4Q8NCY6 345 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 LSM14AQ8ND56 463 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 LILRB1Q8NHL6 650 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 PPP1R14CQ8TAE6 165 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MGARPQ8TDB4 240 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 BRIX1Q8TDN6 353 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 SH3RF3Q8TEJ3 882 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 EDARADDQ8WWZ3 215 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 EZH1Q92800 747 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 JAKMIP2Q96AA8 810 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM120BQ96EK7 910 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 RNF125Q96EQ8 232 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ZNF764Q96H86 408 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ZNF845Q96IR2 970 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 CHAMP1Q96JM3 812 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CLPTM1LQ96KA5 538 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TUBGCP5Q96RT8 1024 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 YME1L1Q96TA2 773 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 EYA3Q99504 573 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PRPF18Q99633 342 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 VRK1Q99986 396 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 C7orf25Q9BPX7 421 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SLX1AQ9BQ83 275 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 RTKNQ9BST9 563 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SOX7Q9BT81 388 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ADI1Q9BV57 179 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 DUSP23Q9BVJ7 150 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CEP41Q9BYV8 373 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FOXP3Q9BZS1 431 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MRPL18Q9H0U6 180 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 CHST8Q9H2A9 424 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MUC13Q9H3R2 512 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MTG2Q9H4K7 406 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 XAB2Q9HCS7 855 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ERVK-5Q9HDB9 667 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CCDC177Q9NQR7 707 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 C1GALT1Q9NS00 363 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SACM1LQ9NTJ5 587 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PDRG1Q9NUG6 133 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 DECR2Q9NUI1 292 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 DCAF16Q9NXF7 216 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PLA2G3Q9NZ20 509 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MARCH2Q9P0N8 246 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 C5AR2Q9P296 337 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TBC1D14Q9P2M4 693 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ASH2LQ9UBL3 628 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SEL1LQ9UBV2 794 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 EIF2B4Q9UI10 523 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 XPO7Q9UIA9 1087 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 RPS6KA6Q9UK32 745 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ACSL6Q9UKU0 697 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TCFL5Q9UL49 500 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 NAP1L2Q9ULW6 460 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 CAPN11Q9UMQ6 739 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PCDHA6Q9UN73 950 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SMG5Q9UPR3 1016 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 KNSTRNQ9Y448 316 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ATP6V0A2Q9Y487 856 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PCDHB6Q9Y5E3 794 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PCDHA1Q9Y5I3 950 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 USP32Q8NFA0 1604 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 NLRP1Q9C000 1473 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SYNRGQ9UMZ2 1314 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TOPAZ1Q8N9V7 1692 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TNRC6CQ9HCJ0 1690 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 MEGF6O75095 1541 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 NEXMIFQ5QGS0 1516 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MAST1Q9Y2H9 1570 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RGPD3A6NKT7 1758 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 RGPD4Q7Z3J3 1758 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms