RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SOWAHAQ2M3V2 549 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 INTS6LQ5JSJ4 861 aaKnown RBP15.34■□□□□ 0.05
VTI1A-209ENST00000496445 GPR158Q5T848 1215 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 ZNF852Q6ZMS4 543 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 LIMS2Q7Z4I7 341 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 TMEM150AQ86TG1 271 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 WDR49Q8IV35 697 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 ARID3BQ8IVW6 561 aaPredicted RBP15.34■□□□□ 0.05
VTI1A-209ENST00000496445 ADGRF2Q8IZF7 708 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 TMEM86AQ8N2M4 240 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 KBTBD7Q8WVZ9 684 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 ACBD6Q9BR61 282 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 PI4K2AQ9BTU6 479 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 BCO2Q9BYV7 579 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
VTI1A-209ENST00000496445 SLC39A2Q9NP94 309 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 CFAP45Q9UL16 551 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 PCDHB5Q9Y5E4 795 aa15.34■□□□□ 0.05
VTI1A-209ENST00000496445 HELZP42694 1942 aaKnown RBP15.34■□□□□ 0.05
VTI1A-209ENST00000496445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-209ENST00000496445 GABRDO14764 452 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 CLIC2O15247 247 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 KLRC4O43908 158 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 TNNC2P02585 160 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 CDC25CP30307 473 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 MAGEA9P43362 315 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 CYP2J2P51589 502 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 MYL7Q01449 175 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 SURF1Q15526 300 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 NFE2Q16621 373 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-209ENST00000496445 SPATA18Q8TC71 538 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 E2F7Q96AV8 911 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 SPATA6Q9NWH7 488 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-209ENST00000496445 SERTAD1Q9UHV2 236 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 GTF3C3Q9Y5Q9 886 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.04
VTI1A-209ENST00000496445 OTOGLQ3ZCN5 2332 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 PVALEFA0A1B0GWK0 134 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 ZNF263O14978 683 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 CHADO15335 359 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 TADA3O75528 432 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 CYP2F1P24903 491 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 WEE1P30291 646 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 RPS9P46781 194 aaKnown RBP15.32■□□□□ 0.04
VTI1A-209ENST00000496445 CYP24A1Q07973 514 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 PSMD6Q15008 389 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 DUOXA2Q1HG44 320 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 SDHAF4Q5VUM1 108 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 HPDLQ96IR7 371 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 CGRRF1Q99675 332 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 SMG9Q9H0W8 520 aaKnown RBP15.32■□□□□ 0.04
VTI1A-209ENST00000496445 TASP1Q9H6P5 420 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 KIAA1586Q9HCI6 787 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 GTF3C4Q9UKN8 822 aa15.32■□□□□ 0.04
VTI1A-209ENST00000496445 NDRG2Q9UN36 371 aaKnown RBP15.32■□□□□ 0.04
VTI1A-209ENST00000496445 EP300Q09472 2414 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 MYBPHLA2RUH7 354 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 MAN2B1O00754 1011 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 F11P03951 625 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 SLFN14P0C7P3 912 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 DLATP10515 647 aaKnown RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PFKFB1P16118 471 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 SOX9P48436 509 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 LHX1P48742 406 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 NLRP12P59046 1061 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PSMC1P62191 440 aaKnown RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 MYO1EQ12965 1108 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 DDR2Q16832 855 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 TRAPPC11Q7Z392 1133 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 YAF2Q8IY57 180 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 CEP57L1Q8IYX8 460 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 XXYLT1Q8NBI6 393 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PAGE5Q96GU1 130 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 ZFYVE19Q96K21 471 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 GCNAQ96QF7 691 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 NELL2Q99435 816 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 SLC46A2Q9BY10 475 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 ABCB6Q9NP58 842 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PRMT8Q9NR22 394 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 OBP2AQ9NY56 170 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 HPSEQ9Y251 543 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 MRPS17Q9Y2R5 130 aaKnown RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 NME7Q9Y5B8 376 aa15.31■□□□□ 0.04
VTI1A-209ENST00000496445 PTPRZ1P23471 2315 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-209ENST00000496445 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 SLC38A8A6NNN8 435 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 LAMTOR5O43504 91 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 ATP2C2O75185 946 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 NOL4O94818 638 aa15.3■□□□□ 0.04
VTI1A-209ENST00000496445 CST3P01034 146 aaPredicted RBP15.3■□□□□ 0.04
VTI1A-209ENST00000496445 LMO2P25791 158 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms