RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 BTDP43251 543 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 PFKPQ01813 784 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 MSLNQ13421 630 aaPredicted RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 C1orf146Q5VVC0 180 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SPTY2D1Q68D10 685 aaPredicted RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 APOBEC3HQ6NTF7 200 aaKnown RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 RAPH1Q70E73 1250 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ZNF410Q86VK4 478 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 TMEM126BQ8IUX1 230 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ULK2Q8IYT8 1036 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ZDHHC14Q8IZN3 488 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 VTI1AQ96AJ9 217 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SENP6Q9GZR1 1112 aaPredicted RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ASIC3Q9UHC3 531 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 RAB26Q9ULW5 256 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 LZTS1Q9Y250 596 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 GPC6Q9Y625 555 aaPredicted RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 ADAMTS3O15072 1205 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 CD48P09326 243 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 ACTN1P12814 892 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SLC5A2P31639 672 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 RPA3P35244 121 aaPredicted RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 TECP42680 631 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 TMED10P49755 219 aaKnown RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 ITGA8P53708 1063 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 FKBP1AP62942 108 aaKnown RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 NFIAQ12857 509 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 PICALMQ13492 652 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SFT2D3Q587I9 215 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 DEPDC1Q5TB30 811 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 RNF207Q6ZRF8 634 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 NEK8Q86SG6 692 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 OLIG1Q8TAK6 271 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 PRPF31Q8WWY3 499 aaKnown RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 DNAJC19Q96DA6 116 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 OXNAD1Q96HP4 312 aaPredicted RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 OSBPL6Q9BZF3 934 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 KIAA1586Q9HCI6 787 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SIX2Q9NPC8 291 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 GRID1Q9ULK0 1009 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SORCS3Q9UPU3 1222 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 NPHP3-ACAD11A0A0J9YXS1 232 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 EXOC1LA0A1B0GW35 172 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SOBPA7XYQ1 873 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SPECC1L-ADORA2AF8WAN1 911 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 PGM3O95394 542 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 ATF2P15336 505 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 FOLH1Q04609 750 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 LRRC41Q15345 812 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SLC1A5Q15758 541 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 MYLK3Q32MK0 819 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 LVRNQ6Q4G3 990 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 USP50Q70EL3 339 aaPredicted RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 ARL10Q8N8L6 244 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 ATP6V0A1Q93050 837 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 EFHD2Q96C19 240 aaPredicted RBP9.51□□□□□ -0.89
HPS4-217ENST00000496385 DNAJC18Q9H819 358 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 TBC1D23Q9NUY8 699 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 BARHL2Q9NY43 387 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 SLC7A8Q9UHI5 535 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 TAGLN3Q9UI15 199 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 PPM1HQ9ULR3 514 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 PTPN22Q9Y2R2 807 aa9.51□□□□□ -0.89
HPS4-217ENST00000496385 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CAPN14A8MX76 684 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 H3BNX3 289 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 SLC16A3O15427 465 aaKnown RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 BAIAP3O94812 1187 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 KRT15P19012 456 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CDH2P19022 906 aaPredicted RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CDK9P50750 372 aaKnown RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 DLG1Q12959 904 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 APOFQ13790 326 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 PRKG1Q13976 671 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 NDUFA5Q16718 116 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 KRT79Q5XKE5 535 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CDC42EP5Q6NZY7 148 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CHSY1Q86X52 802 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CATSPER1Q8NEC5 780 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 RFWD2Q8NHY2 731 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 PPP1R14CQ8TAE6 165 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 GIPC3Q8TF64 312 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CD101Q93033 1021 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 BHMTQ93088 406 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 HAUS8Q9BT25 410 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 TMEM120AQ9BXJ8 343 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 MANSC1Q9H8J5 431 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 ARHGEF4Q9NR80 690 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 RSL24D1Q9UHA3 163 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms