RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ARHGEF19Q8IW93 802 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 NUP133Q8WUM0 1156 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 LARP4BQ92615 738 aaKnown RBP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 IQCDQ96DY2 449 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 PHACTR3Q96KR7 559 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 SNX22Q96L94 193 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 TINAGL1Q9GZM7 467 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 CDHR4A6H8M9 788 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 TMEM191CA6NGB0 347 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 THAP12O43422 761 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 AGFG2O95081 481 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 UNC5CO95185 931 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 MT-ND5P03915 603 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 GRPP07492 148 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 FGFR2P21802 821 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 KLRC1P26715 233 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 SLC11A2P49281 568 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 INHBCP55103 352 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 BLOC1S1P78537 153 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 TAP1Q03518 808 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 DPTQ07507 201 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 PDCD2Q16342 344 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-207ENST00000495817 AMOTQ4VCS5 1084 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 PRR16Q569H4 304 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 HSP90AB4PQ58FF6 505 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 KLHDC7AQ5VTJ3 777 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 MAPKAPK5Q8IW41 473 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 DNAJC5GQ8N7S2 189 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 PCSK9Q8NBP7 692 aaKnown RBP7.02□□□□□ -1.29
CCDC39-207ENST00000495817 CPEB3Q8NE35 698 aaKnown RBP7.02□□□□□ -1.29
CCDC39-207ENST00000495817 TBC1D15Q8TC07 691 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 IPCEF1Q8WWN9 437 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-207ENST00000495817 MLST8Q9BVC4 326 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 EIF2AQ9BY44 585 aaKnown RBP7.02□□□□□ -1.29
CCDC39-207ENST00000495817 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 KCNE5Q9UJ90 142 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 PCDHGB2Q9Y5G2 931 aa7.02□□□□□ -1.29
CCDC39-207ENST00000495817 A0A087WV62 115 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CENPVL1A0A0U1RR11 272 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 A0A1B0GTW7 788 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CLCA1A8K7I4 914 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 PYCARD-AS1I3L0S3 204 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 MYO1CO00159 1063 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 AREL1O15033 823 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 NDUFA10O95299 355 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 HARSP12081 509 aaKnown RBP7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CKBP12277 381 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 HALP42357 657 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 HSPA7P48741 367 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 ZNF135P52742 658 aaPredicted RBP7.01□□□□□ -1.29
CCDC39-207ENST00000495817 MAPK10P53779 464 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 OCA2Q04671 838 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 RAPGEF1Q13905 1077 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 SLC35G1Q2M3R5 365 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 TMEM95Q3KNT9 176 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 SPDYE7PQ495Y7 208 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CRB2Q5IJ48 1285 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 TSHZ3Q63HK5 1081 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 PGBD2Q6P3X8 592 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CATSPERGQ6ZRH7 1159 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 SYTL1Q8IYJ3 562 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 TMIEQ8NEW7 156 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 PPM1EQ8WY54 764 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 KLHL32Q96NJ5 620 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 MED15Q96RN5 788 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 TTLL2Q9BWV7 592 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 TEX101Q9BY14 249 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CDC23Q9UJX2 597 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 TMX2Q9Y320 296 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 CEP83Q9Y592 693 aa7.01□□□□□ -1.29
CCDC39-207ENST00000495817 WDR33Q9C0J8 1336 aaKnown RBP7.01□□□□□ -1.29
CCDC39-207ENST00000495817 PLA2G6O60733 806 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 CDKL5O76039 1030 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 PIM1P11309 404 aaPredicted RBP7□□□□□ -1.29
CCDC39-207ENST00000495817 XRCC6P12956 609 aaKnown RBP eCLIP7□□□□□ -1.29
CCDC39-207ENST00000495817 SLC6A2P23975 617 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 EEF1GP26641 437 aaKnown RBP7□□□□□ -1.29
CCDC39-207ENST00000495817 UCP3P55916 312 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 GUCY1B3Q02153 619 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 MPEG1Q2M385 716 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 FAM160B1Q5W0V3 765 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 PPP1R32Q7Z5V6 425 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 MRGPRGQ86SM5 289 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 NKAPQ8N5F7 415 aaKnown RBP7□□□□□ -1.29
CCDC39-207ENST00000495817 SLC15A4Q8N697 577 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 ANKRD42Q8N9B4 389 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 FANCBQ8NB91 859 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 SLC17A8Q8NDX2 589 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 PNKPQ96T60 521 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 CNPPD1Q9BV87 410 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 SPATA5L1Q9BVQ7 753 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 IMPG2Q9BZV3 1241 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 RNF181Q9P0P0 153 aa7□□□□□ -1.29
CCDC39-207ENST00000495817 ING1Q9UK53 422 aaPredicted RBP7□□□□□ -1.29
CCDC39-207ENST00000495817 hCG_1642624A0A1W2PR95 340 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 HNRNPDLO14979 420 aaKnown RBP6.99□□□□□ -1.29
CCDC39-207ENST00000495817 NBNO60934 754 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 TXNP10599 105 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms