RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 SMG5Q9UPR3 1016 aaKnown RBP19.8■□□□□ 0.76
CLCNKA-207ENST00000495784 SNX9Q9Y5X1 595 aa19.8■□□□□ 0.76
CLCNKA-207ENST00000495784 TCHHQ07283 1943 aa19.8■□□□□ 0.76
CLCNKA-207ENST00000495784 GPR179Q6PRD1 2367 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 MYBPHLA2RUH7 354 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 PPP6R2O75170 966 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 ACAT1P24752 427 aaKnown RBP19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 AVPR1AP37288 418 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 CXCL12P48061 93 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 NLRP12P59046 1061 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 AMPD3Q01432 767 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 INTS6LQ5JSJ4 861 aaKnown RBP19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 CELF5Q8N6W0 485 aaKnown RBP19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 LEO1Q8WVC0 666 aaPredicted RBP19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 HPS3Q969F9 1004 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 DHX58Q96C10 678 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 ANKRD36BP1Q96IX9 119 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 GDAP2Q9NXN4 497 aa19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 MAGED2Q9UNF1 606 aaPredicted RBP19.79■□□□□ 0.76
CLCNKA-207ENST00000495784 ZNF233A6NK53 670 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 CSH1P0DML2 217 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 CSH2P0DML3 217 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 HMGA1P17096 107 aaKnown RBP19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 DDX6P26196 483 aaKnown RBP eCLIP19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 GPR15P49685 360 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 RPL10AP62906 217 aaKnown RBP19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 ASIC1P78348 528 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 MYO1EQ12965 1108 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 DGKKQ5KSL6 1271 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 ADGRF2Q8IZF7 708 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 CMTM8Q8IZV2 173 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 SPEM1Q8N4L4 309 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 TOP6BLQ8N6T0 577 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 MAB21L3Q8N8X9 362 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 IQUBQ8NA54 791 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 GLIS3Q8NEA6 775 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 CXorf38Q8TB03 319 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 SPATA18Q8TC71 538 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 MRPS31Q92665 395 aaKnown RBP19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 RMDN1Q96DB5 314 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 TRIM9Q9C026 710 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 ABCB6Q9NP58 842 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 RBM12Q9NTZ6 932 aaKnown RBP19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 INTS13Q9NVM9 706 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 KBTBD4Q9NVX7 518 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 SIX4Q9UIU6 781 aa19.78■□□□□ 0.76
CLCNKA-207ENST00000495784 YEATS4O95619 227 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 TNNC2P02585 160 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 F11P03951 625 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 TDGF1P13385 188 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 PCSK1P29120 753 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 LHX1P48742 406 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 SATB1Q01826 763 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 TNK2Q07912 1038 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 GAS6Q14393 721 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 SURF1Q15526 300 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 E2F4Q16254 413 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 ITPRIPL2Q3MIP1 535 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 SDHAF4Q5VUM1 108 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 LMBRD2Q68DH5 695 aaPredicted RBP19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 SCARA3Q6AZY7 606 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 TXNDC11Q6PKC3 985 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 TMEM150AQ86TG1 271 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 CBWD2Q8IUF1 395 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 STKLD1Q8NE28 680 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 HSPBP1Q9NZL4 362 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 GTF3C4Q9UKN8 822 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 RAB23Q9ULC3 237 aa19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 NUP210Q8TEM1 1887 aaPredicted RBP19.77■□□□□ 0.76
CLCNKA-207ENST00000495784 CUTAO60888 179 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 CYP2F1P24903 491 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 PON2Q15165 354 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 DDR2Q16832 855 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 DUOXA2Q1HG44 320 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 FOXD4L5Q5VV16 416 aaPredicted RBP19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 TXNDC8Q6A555 127 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 OSTM1Q86WC4 334 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 SPATA2LQ8IUW3 424 aaPredicted RBP19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 GPR161Q8N6U8 529 aaKnown RBP19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 OR5B17Q8NGF7 314 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 FOXD4L4Q8WXT5 416 aaPredicted RBP19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 HPDLQ96IR7 371 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 KIAA1586Q9HCI6 787 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 GKN1Q9NS71 199 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 UXTQ9UBK9 157 aaPredicted RBP19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 FRYLO94915 3013 aa19.76■□□□□ 0.75
CLCNKA-207ENST00000495784 GABRDO14764 452 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 EIF3DO15371 548 aaKnown RBP eCLIP19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 SOWAHAQ2M3V2 549 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 FAM26FQ5R3K3 315 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 CC2D1AQ6P1N0 951 aaPredicted RBP19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 SHC4Q6S5L8 630 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 Q6ZS52 159 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 MON1AQ86VX9 555 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 USP13Q92995 863 aaPredicted RBP19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 PKMYT1Q99640 499 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 KIF9Q9HAQ2 790 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 TDP1Q9NUW8 608 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 GMEB2Q9UKD1 530 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 CCL26Q9Y258 94 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms