RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SPATA4Q8NEY3 305 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 SAMD11Q96NU1 681 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 NT5C1AQ9BXI3 368 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 CARD9Q9H257 536 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 TMEM161AQ9NX61 479 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 SIX4Q9UIU6 781 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 TTC7AQ9ULT0 858 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-214ENST00000495485 BARX2Q9UMQ3 279 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-214ENST00000495485 ALG6Q9Y672 507 aa10.88□□□□□ -0.67
HDAC3-214ENST00000495485 SZT2Q5T011 3432 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ARHGEF37A1IGU5 675 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 C9IYK1 514 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 NCK2O43639 380 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 CEP104O60308 925 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 RECQL4O94761 1208 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 WEE2P0C1S8 567 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 NOMO3P69849 1222 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 HTRA4P83105 476 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ZBTB6Q15916 424 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 SGO2Q562F6 1265 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 XKR4Q5GH76 650 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 HABP4Q5JVS0 413 aaKnown RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ALKAL1Q6UXT8 129 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 SCARA5Q6ZMJ2 495 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 DPH6Q7L8W6 267 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 HERC6Q8IVU3 1022 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 OLIG1Q8TAK6 271 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 CPA5Q8WXQ8 436 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ARHGEF26Q96DR7 871 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 HEXIM2Q96MH2 286 aaKnown RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 RUNDC3BQ96NL0 473 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ADAM2Q99965 735 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 APOL6Q9BWW8 343 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 PARD6BQ9BYG5 372 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 IP6K2Q9UHH9 426 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ANAPC7Q9UJX3 599 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 LRFN2Q9ULH4 789 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 STXBP5LQ9Y2K9 1186 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 PCDHB7Q9Y5E2 793 aa10.87□□□□□ -0.67
HDAC3-214ENST00000495485 PDCD11Q14690 1871 aaKnown RBP10.87□□□□□ -0.67
HDAC3-214ENST00000495485 ZNF185O15231 689 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 HUS1O60921 280 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 CILPO75339 1184 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 CTNNA2P26232 953 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 CXCR5P32302 372 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 TAF6P49848 677 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 RWDD2BP57060 319 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 INCA1Q0VD86 236 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 CNGA2Q16280 664 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 ZNF394Q53GI3 561 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 ODF2Q5BJF6 829 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 C8orf74Q6P047 294 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 WDR93Q6P2C0 686 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 MON1BQ7L1V2 547 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 MRPL10Q7Z7H8 261 aaKnown RBP10.86□□□□□ -0.67
HDAC3-214ENST00000495485 PALB2Q86YC2 1186 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 CMTR2Q8IYT2 770 aaKnown RBP10.86□□□□□ -0.67
HDAC3-214ENST00000495485 RASGEF1CQ8N431 466 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 IPO4Q8TEX9 1081 aaKnown RBP10.86□□□□□ -0.67
HDAC3-214ENST00000495485 COG1Q8WTW3 980 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
HDAC3-214ENST00000495485 SNX25Q9H3E2 840 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 ACBD3Q9H3P7 528 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 FAM105AQ9NUU6 356 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 CXXC1Q9P0U4 656 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-214ENST00000495485 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 HESX1Q9UBX0 185 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 STK39Q9UEW8 545 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 MTUS1Q9ULD2 1270 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 GIT1Q9Y2X7 761 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 IPPQ9Y573 584 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 NLRC5Q86WI3 1866 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 TRIP11Q15643 1979 aa10.86□□□□□ -0.67
HDAC3-214ENST00000495485 TDRD15B5MCY1 1934 aaKnown RBP10.86□□□□□ -0.67
HDAC3-214ENST00000495485 SMIM28A0A1B0GU29 152 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 TMEM110-MUSTN1A8MSY1 372 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 TLL1O43897 1013 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 THP07101 528 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 RHOXF2BP0C7M4 288 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 H2AFXP16104 143 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 COMTP21964 271 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 MMP8P22894 467 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 BRD2P25440 801 aaKnown RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 RPL9P32969 192 aaKnown RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 MAN1A1P33908 653 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 RAD23BP54727 409 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 SLC8A3P57103 927 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 RBM10P98175 930 aaKnown RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 GPS2Q13227 327 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms