RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 GABRDO14764 452 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 EXOC3O60645 756 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 MICAL2O94851 1124 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 RPN1P04843 607 aaKnown RBP11.39□□□□□ -0.59
NELFE-213ENST00000494956 TARSP26639 723 aaKnown RBP11.39□□□□□ -0.59
NELFE-213ENST00000494956 GDI1P31150 447 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 TUFMP49411 452 aaKnown RBP11.39□□□□□ -0.59
NELFE-213ENST00000494956 MYL6P60660 151 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 DLG4P78352 724 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 TSPY1Q01534 308 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 PHLDB3Q6NSJ2 640 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 HS2ST1Q7LGA3 356 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 TMEM150AQ86TG1 271 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 ARID3BQ8IVW6 561 aaPredicted RBP11.39□□□□□ -0.59
NELFE-213ENST00000494956 PJA1Q8NG27 643 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 TTC8Q8TAM2 541 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 SPPL2BQ8TCT7 592 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 ZFYVE19Q96K21 471 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 FNBP1Q96RU3 617 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 MMS19Q96T76 1030 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
NELFE-213ENST00000494956 KCTD10Q9H3F6 313 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 MAGED2Q9UNF1 606 aaPredicted RBP11.39□□□□□ -0.59
NELFE-213ENST00000494956 PCDHB5Q9Y5E4 795 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 CACNA1IQ9P0X4 2223 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 ANAPC1Q9H1A4 1944 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 FAM237AA0A1B0GTK4 181 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 KANSL1LA0AUZ9 987 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 FAM170BA6NMN3 283 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 LRRIQ3A6PVS8 624 aaPredicted RBP11.38□□□□□ -0.59
NELFE-213ENST00000494956 HMGA1P17096 107 aaKnown RBP11.38□□□□□ -0.59
NELFE-213ENST00000494956 PSMC3P17980 439 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 SOX9P48436 509 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 MYL7Q01449 175 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 MYO1EQ12965 1108 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 VEPH1Q14D04 833 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 SURF1Q15526 300 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 KRBA2Q6ZNG9 492 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 LIMS2Q7Z4I7 341 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 FRMD5Q7Z6J6 570 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 ITIH5Q86UX2 942 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 SCN4BQ8IWT1 228 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 C12orf56Q8IXR9 622 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 TOP6BLQ8N6T0 577 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 LEMD2Q8NC56 503 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 ERCC4Q92889 916 aaPredicted RBP11.38□□□□□ -0.59
NELFE-213ENST00000494956 SYT15Q9BQS2 421 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 ACBD6Q9BR61 282 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
NELFE-213ENST00000494956 SLC46A2Q9BY10 475 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 DPEP3Q9H4B8 488 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 KIAA1586Q9HCI6 787 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 LTB4R2Q9NPC1 389 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.38□□□□□ -0.593e-9■■■■■ 65.2
NELFE-213ENST00000494956 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 ASB3Q9Y575 518 aa11.38□□□□□ -0.59
NELFE-213ENST00000494956 TADA3O75528 432 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 ZNF202O95125 648 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 VNN1O95497 513 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 F11P03951 625 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 CDH8P55286 799 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 NLRP12P59046 1061 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 PFKPQ01813 784 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 PRKCQQ04759 706 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 DPYDQ12882 1025 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 FZD5Q13467 585 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 TAF12Q16514 161 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 WDR72Q3MJ13 1102 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 TDRD10Q5VZ19 366 aaKnown RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 TXNDC8Q6A555 127 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 SPATA2LQ8IUW3 424 aaPredicted RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 TMEM86AQ8N2M4 240 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 MAB21L3Q8N8X9 362 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 RIN3Q8TB24 985 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 MYLPFQ96A32 169 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 SCAND2PQ9GZW5 306 aaPredicted RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 TRPV4Q9HBA0 871 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 NDRG2Q9UN36 371 aaKnown RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
NELFE-213ENST00000494956 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
NELFE-213ENST00000494956 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 A0A1W2PQ27 194 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 A0A1W2PQ64 194 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 A0A1W2PQD8 194 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 SLC38A8A6NNN8 435 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 ARNTLO00327 626 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 ZNF263O14978 683 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 PHACTR2O75167 634 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 C4BPAP04003 597 aaKnown RBP11.36□□□□□ -0.59
NELFE-213ENST00000494956 NR3C1P04150 777 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 WARSP23381 471 aaKnown RBP11.36□□□□□ -0.59
NELFE-213ENST00000494956 BDNFP23560 247 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms