RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ATF6P18850 670 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 PCSK1P29120 753 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 CCR2P41597 374 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 ASPAP45381 313 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 MXI1P50539 228 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 DCAF17Q5H9S7 520 aaPredicted RBP18.31■□□□□ 0.52
SNX17-209ENST00000494893 GET4Q7L5D6 327 aaPredicted RBP18.31■□□□□ 0.52
SNX17-209ENST00000494893 FRMD5Q7Z6J6 570 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 IRF2BP1Q8IU81 584 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 ZDHHC14Q8IZN3 488 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 TDRD5Q8NAT2 981 aaKnown RBP18.31■□□□□ 0.52
SNX17-209ENST00000494893 TAF4BQ92750 862 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 SRRTQ9BXP5 876 aaKnown RBP18.31■□□□□ 0.52
SNX17-209ENST00000494893 BCO2Q9BYV7 579 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 ABI2Q9NYB9 513 aaPredicted RBP18.31■□□□□ 0.52
SNX17-209ENST00000494893 CDH9Q9ULB4 789 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 COQ4Q9Y3A0 265 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 NR2E1Q9Y466 385 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 MOSPD3O75425 235 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 FSHRP23945 695 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 GNL1P36915 607 aaPredicted RBP18.3■□□□□ 0.52
SNX17-209ENST00000494893 GPR15P49685 360 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 EPHA5P54756 1037 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 MARSP56192 900 aaKnown RBP18.3■□□□□ 0.52
SNX17-209ENST00000494893 PABPC1LQ4VXU2 614 aaKnown RBP18.3■□□□□ 0.52
SNX17-209ENST00000494893 PRSS36Q5K4E3 855 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 TCERG1LQ5VWI1 586 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 C11orf57Q6ZUT1 292 aaPredicted RBP18.3■□□□□ 0.52
SNX17-209ENST00000494893 OTOP3Q7RTS5 596 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 TMC8Q8IU68 726 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 OR6B3Q8NGW1 331 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 SPPL2BQ8TCT7 592 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 C2orf15Q8WU43 125 aaKnown RBP18.3■□□□□ 0.52
SNX17-209ENST00000494893 TCEAL4Q96EI5 215 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 CORO1BQ9BR76 489 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 AVENQ9NQS1 362 aaPredicted RBP18.3■□□□□ 0.52
SNX17-209ENST00000494893 HMGXB4Q9UGU5 601 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 MUTYHQ9UIF7 546 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 PCDHB5Q9Y5E4 795 aa18.3■□□□□ 0.52
SNX17-209ENST00000494893 ASGR2P07307 311 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 PTPN2P17706 415 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 CYP2F1P24903 491 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 NOP14P78316 857 aaKnown RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 SMARCB1Q12824 385 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 NFE2Q16621 373 aaPredicted RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 CCDC40Q4G0X9 1142 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 CT47A1Q5JQC4 288 aaPredicted RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 STKLD1Q8NE28 680 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 FBXL13Q8NEE6 735 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 MYLPFQ96A32 169 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 SEPT5Q99719 369 aaPredicted RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 NAT10Q9H0A0 1025 aaKnown RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 SNX25Q9H3E2 840 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 METTL14Q9HCE5 456 aaKnown RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 ZNF334Q9HCZ1 680 aaPredicted RBP18.29■□□□□ 0.52
SNX17-209ENST00000494893 RAB20Q9NX57 234 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 LIMD1Q9UGP4 676 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 DACH1Q9UI36 760 aa18.29■□□□□ 0.52
SNX17-209ENST00000494893 STX10O60499 249 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 CEBPBP17676 345 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 GBP2P32456 591 aaPredicted RBP18.28■□□□□ 0.52
SNX17-209ENST00000494893 ZNF165P49910 485 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 MGAT5BQ3V5L5 792 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 MDH1BQ5I0G3 518 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 NPAS3Q8IXF0 933 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 ST13P5Q8NFI4 369 aaPredicted RBP18.28■□□□□ 0.52
SNX17-209ENST00000494893 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 FAM200AQ8TCP9 573 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 ING5Q8WYH8 240 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 FGF13Q92913 245 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 TATDN2Q93075 761 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 TWNKQ96RR1 684 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 RBSNQ9H1K0 784 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 ABCB6Q9NP58 842 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 TMEM30AQ9NV96 361 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 EPS15L1Q9UBC2 864 aa18.28■□□□□ 0.52
SNX17-209ENST00000494893 A8MXQ7 604 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 PI4K2BG5E9Z4 385 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 LAMP2P13473 410 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 PTPN1P18031 435 aaKnown RBP18.27■□□□□ 0.52
SNX17-209ENST00000494893 ALDH1A3P47895 512 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 FMO5P49326 533 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 TUFMP49411 452 aaKnown RBP18.27■□□□□ 0.52
SNX17-209ENST00000494893 PLD1Q13393 1074 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 ORC1Q13415 861 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 DNAJB7Q7Z6W7 309 aaPredicted RBP18.27■□□□□ 0.52
SNX17-209ENST00000494893 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 GPR152Q8TDT2 470 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 GIPC2Q8TF65 315 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 PSMG2Q969U7 264 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 ACSF2Q96CM8 615 aaPredicted RBP18.27■□□□□ 0.52
SNX17-209ENST00000494893 PCED1BQ96HM7 432 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 ZNF512Q96ME7 567 aaPredicted RBP18.27■□□□□ 0.52
SNX17-209ENST00000494893 BPIFA3Q9BQP9 254 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 NIF3L1Q9GZT8 377 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms