RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CCT8L1PA6NM43 557 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 LACTBL1A8MY62 500 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 SGK1O00141 431 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 GPR25O00155 361 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 DNALI1O14645 258 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 B4GALT4O60513 344 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 NFICP08651 508 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 CDKN2BP42772 138 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 TAP1Q03518 808 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 ERO1BQ86YB8 467 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 EMC1Q8N766 993 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 ACTR5Q9H9F9 607 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 DDX56Q9NY93 547 aaKnown RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 TPX2Q9ULW0 747 aaKnown RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 WDR90Q96KV7 1748 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 HBP1O60381 514 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 GH1P01241 217 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 PECAM1P16284 738 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 CDH5P33151 784 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 SCTRP47872 440 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 COPS2P61201 443 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 MBTD1Q05BQ5 628 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 STAT4Q14765 748 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 GJC2Q5T442 439 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 CCDC62Q6P9F0 684 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 CCHCR1Q8TD31 782 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 SDCBP2Q9H190 292 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 PCSK1NQ9UHG2 260 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
CHMP3-209ENST00000494623 DRG1Q9Y295 367 aaKnown RBP11.81□□□□□ -0.52
CHMP3-209ENST00000494623 SIGLEC16A6NMB1 481 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 POC1B-GALNT4F8VUJ3 575 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 GOLGA8MH3BSY2 632 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 MED7O43513 233 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 CDH16O75309 829 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 TCEA3O75764 348 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 ITGB3P05106 788 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 STAG3L1P0CL83 205 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 IL1R2P27930 398 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 RAD23BP54727 409 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 TMED2Q15363 201 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 DRICH1Q6PGQ1 229 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 KIAA0319LQ8IZA0 1049 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 TAB3Q8N5C8 712 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 ARFGAP1Q8N6T3 406 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 C1orf127Q8N9H9 656 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 MRRFQ96E11 262 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 CPB2Q96IY4 423 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 CPXM1Q96SM3 734 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 NSRP1Q9H0G5 558 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 KDM4CQ9H3R0 1056 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 SMYD3Q9H7B4 428 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 STRIP2Q9ULQ0 834 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 TNFSF13BQ9Y275 285 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 CXCL11O14625 94 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 NUGGCQ68CJ6 796 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 JADE1Q6IE81 842 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 CFAP57Q96MR6 1250 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 METTL5Q9NRN9 209 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 FGFR1OP2Q9NVK5 253 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 HMGXB4Q9UGU5 601 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 GGT7Q9UJ14 662 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 A0A087WZ62 844 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 EXOC1LA0A1B0GW35 172 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 CST8O60676 142 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 LRCH4O75427 683 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 INSRRP14616 1297 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 STX2P32856 288 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 ITIH4Q14624 930 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 OASLQ15646 514 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 HADHQ16836 314 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 LACTB2Q53H82 288 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 RELL1Q8IUW5 271 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 ANKRD13AQ8IZ07 590 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 ZBED8Q8IZ13 594 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 PAIP2Q9BPZ3 127 aaKnown RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 FDXACB1Q9BRP7 624 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-209ENST00000494623 VPS37BQ9H9H4 285 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 SLC40A1Q9NP59 571 aa11.8□□□□□ -0.52
CHMP3-209ENST00000494623 DNAJC25-GNG10A0A024R161 153 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 C3orf70A6NLC5 250 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-209ENST00000494623 RASA4BC9J798 803 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 PIK3R2O00459 728 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 RASA4O43374 803 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 IL18RAPO95256 599 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 ERBB2P04626 1255 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 CD48P09326 243 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-209ENST00000494623 OSBPP22059 807 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 CEP128Q6ZU80 1094 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
CHMP3-209ENST00000494623 KCTD6Q8NC69 237 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms