RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SOWAHAQ2M3V2 549 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 MGAT5BQ3V5L5 792 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 OSTM1Q86WC4 334 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 FLCNQ8NFG4 579 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 CCDC127Q96BQ5 260 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 CCDC34Q96HJ3 373 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PKMYT1Q99640 499 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 SEPT5Q99719 369 aaPredicted RBP14.14□□□□□ -0.15
ERCC3-209ENST00000494464 TRPV4Q9HBA0 871 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 ABCB6Q9NP58 842 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 DMAC2Q9NW81 257 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 ABI2Q9NYB9 513 aaPredicted RBP14.14□□□□□ -0.15
ERCC3-209ENST00000494464 CA14Q9ULX7 337 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PCDHB5Q9Y5E4 795 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 DENND4CQ5VZ89 1909 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PTPRDP23468 1912 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 A0A1W2PRU2 124 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
ERCC3-209ENST00000494464 SOAT2O75908 522 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 AP3M2P53677 418 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 CLDN10P78369 228 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 TEAD2Q15562 447 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 NFIL3Q16649 462 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 FAM78AQ5JUQ0 283 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 DNAJB7Q7Z6W7 309 aaPredicted RBP14.13□□□□□ -0.15
ERCC3-209ENST00000494464 KBTBD7Q8WVZ9 684 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 SMARCD2Q92925 531 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 LPIN3Q9BQK8 851 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 IRF2BPLQ9H1B7 796 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 TBC1D17Q9HA65 648 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 ZFP14Q9HCL3 533 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 ZNF334Q9HCZ1 680 aaPredicted RBP14.13□□□□□ -0.15
ERCC3-209ENST00000494464 TMLHEQ9NVH6 421 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 HOOK1Q9UJC3 728 aaKnown RBP14.13□□□□□ -0.15
ERCC3-209ENST00000494464 TRAF3IP3Q9Y228 551 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 MIA3Q5JRA6 1907 aa14.13□□□□□ -0.15
ERCC3-209ENST00000494464 KIF26AQ9ULI4 1882 aaPredicted RBP14.12□□□□□ -0.15
ERCC3-209ENST00000494464 NR3C1P04150 777 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 GJA1P17302 382 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 WARSP23381 471 aaKnown RBP14.12□□□□□ -0.15
ERCC3-209ENST00000494464 STARD6P59095 220 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 PRKCQQ04759 706 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 CFAP221Q4G0U5 840 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 TANGO2Q6ICL3 276 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 GAREM2Q75VX8 874 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 ZSCAN18Q8TBC5 510 aaPredicted RBP14.12□□□□□ -0.15
ERCC3-209ENST00000494464 PLEKHO2Q8TD55 490 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 PARD3BQ8TEW8 1205 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 DEPDC1BQ8WUY9 529 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 DNASE1L2Q92874 299 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 E2F7Q96AV8 911 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 FUBP3Q96I24 572 aaKnown RBP eCLIP14.12□□□□□ -0.15
ERCC3-209ENST00000494464 SHDQ96IW2 340 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 ZSWIM3Q96MP5 696 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 BPIFA3Q9BQP9 254 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 MKNK1Q9BUB5 465 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 DDX23Q9BUQ8 820 aaKnown RBP14.12□□□□□ -0.15
ERCC3-209ENST00000494464 PLA2G2FQ9BZM2 168 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 VRTNQ9H8Y1 702 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 CBX8Q9HC52 389 aa14.12□□□□□ -0.15
ERCC3-209ENST00000494464 LRRIQ3A6PVS8 624 aaPredicted RBP14.11□□□□□ -0.15
ERCC3-209ENST00000494464 MAPK13O15264 365 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 TACC1O75410 805 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 FAM163BP0C2L3 166 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 ACAT1P24752 427 aaKnown RBP14.11□□□□□ -0.15
ERCC3-209ENST00000494464 GABRR2P28476 465 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 CDC25CP30307 473 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
ERCC3-209ENST00000494464 ATICP31939 592 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 CASP4P49662 377 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 ZNF165P49910 485 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 MLF2Q15773 248 aaPredicted RBP14.11□□□□□ -0.15
ERCC3-209ENST00000494464 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 GUF1Q8N442 669 aaKnown RBP14.11□□□□□ -0.15
ERCC3-209ENST00000494464 ZNF516Q92618 1163 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 SYT15Q9BQS2 421 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
ERCC3-209ENST00000494464 XYLT2Q9H1B5 865 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 SLITRK6Q9H5Y7 841 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 IL21Q9HBE4 155 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 ZMYM5Q9UJ78 669 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 CDH9Q9ULB4 789 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 COL4A3Q01955 1670 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 TICRRQ7Z2Z1 1910 aa14.11□□□□□ -0.15
ERCC3-209ENST00000494464 PI15O43692 258 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 CALUO43852 315 aaPredicted RBP14.1□□□□□ -0.15
ERCC3-209ENST00000494464 CST3P01034 146 aaPredicted RBP14.1□□□□□ -0.15
ERCC3-209ENST00000494464 PSMC3P17980 439 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 RFX1P22670 979 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 WEE1P30291 646 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 RPL10AP62906 217 aaKnown RBP14.1□□□□□ -0.15
ERCC3-209ENST00000494464 TNNC1P63316 161 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 TRPC3Q13507 836 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 MAPRE1Q15691 268 aaKnown RBP14.1□□□□□ -0.15
ERCC3-209ENST00000494464 ARHGAP15Q53QZ3 475 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 TDRD10Q5VZ19 366 aaKnown RBP14.1□□□□□ -0.15
ERCC3-209ENST00000494464 FAM171BQ6P995 826 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 VITQ6UXI7 678 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms