RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 SLC9A6Q92581 669 aa8.85□□□□□ -0.99
HMGB3P14-201ENST00000494195 TTC17Q96AE7 1141 aa8.85□□□□□ -0.99
HMGB3P14-201ENST00000494195 A0A087WWL8 130 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 ISM1B1AKI9 464 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 YY2O15391 372 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 TBC1D4O60343 1298 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 PROZP22891 400 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 CD6P30203 668 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 ZNF134P52741 427 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 LOXL3P58215 753 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 RBM20Q5T481 1227 aaKnown RBP8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 TMEM108Q6UXF1 575 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 DNAJC5GQ8N7S2 189 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 B3GALNT2Q8NCR0 500 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 LRRC27Q9C0I9 530 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 SMURF2Q9HAU4 748 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 PAXBP1Q9Y5B6 917 aa8.84□□□□□ -0.99
HMGB3P14-201ENST00000494195 MGEA5O60502 916 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 CYP2C9P11712 490 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 XRCC6P12956 609 aaKnown RBP eCLIP8.83□□□□□ -1
HMGB3P14-201ENST00000494195 PEX2P28328 305 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 ADRA1BP35368 520 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 FOLR3P41439 243 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 WNT3P56703 355 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 NXPH1P58417 271 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 ITIH3Q06033 890 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 SLC13A2Q13183 592 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 CTBP1Q13363 440 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 HSP90AB2PQ58FF8 381 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 FAM109AQ8N4B1 249 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 SLC15A4Q8N697 577 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 TOR1AIP2Q8NFQ8 470 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 MYCBPAPQ8TBZ2 947 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 APIPQ96GX9 242 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 PGBD1Q96JS3 809 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 NELL2Q99435 816 aa8.83□□□□□ -1
HMGB3P14-201ENST00000494195 GEMIN8Q9NWZ8 242 aaKnown RBP8.83□□□□□ -1
HMGB3P14-201ENST00000494195 MYF5P13349 255 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 BRAFP15056 766 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
HMGB3P14-201ENST00000494195 SUMO3P55854 103 aaPredicted RBP8.82□□□□□ -1
HMGB3P14-201ENST00000494195 MRPS35P82673 323 aaKnown RBP8.82□□□□□ -1
HMGB3P14-201ENST00000494195 SEMA5AQ13591 1074 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 RAB32Q13637 225 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 SLC44A4Q53GD3 710 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 SFRP4Q6FHJ7 346 aaPredicted RBP8.82□□□□□ -1
HMGB3P14-201ENST00000494195 TSHZ1Q6ZSZ6 1077 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 FAM136AQ96C01 138 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 FBXL20Q96IG2 436 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 TPSD1Q9BZJ3 242 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 AMBRA1Q9C0C7 1298 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 LRIT1Q9P2V4 623 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 CPNE7Q9UBL6 633 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 SHOC2Q9UQ13 582 aa8.82□□□□□ -1
HMGB3P14-201ENST00000494195 MPPED1O15442 326 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 PXNP49023 591 aaPredicted RBP8.81□□□□□ -1
HMGB3P14-201ENST00000494195 LILRA4P59901 499 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 PURAQ00577 322 aaKnown RBP8.81□□□□□ -1
HMGB3P14-201ENST00000494195 PTPRRQ15256 657 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 CNGA2Q16280 664 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 NBPF8Q3BBV2 869 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 KIAA0895LQ68EN5 471 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 MAML1Q92585 1016 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 AGAP2Q99490 1192 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 ACTRT3Q9BYD9 372 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 KRTAP4-2Q9BYR5 136 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 ZNF518BQ9C0D4 1074 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 KIAA1586Q9HCI6 787 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 DDX21Q9NR30 783 aaKnown RBP eCLIP8.81□□□□□ -1
HMGB3P14-201ENST00000494195 STK32BQ9NY57 414 aa8.81□□□□□ -1
HMGB3P14-201ENST00000494195 TYRP1P17643 537 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 SATB1Q01826 763 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 VPS53Q5VIR6 699 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 MPP5Q8N3R9 675 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 ACTRT2Q8TDY3 377 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 PTDSS2Q9BVG9 487 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 OGDHLQ9ULD0 1010 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
HMGB3P14-201ENST00000494195 TRIM43BA6NCK2 446 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
HMGB3P14-201ENST00000494195 HLTFQ14527 1009 aaKnown RBP eCLIP8.79□□□□□ -1
HMGB3P14-201ENST00000494195 ZNF169Q14929 603 aaPredicted RBP8.79□□□□□ -1
HMGB3P14-201ENST00000494195 ICE2Q659A1 982 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 GAS2L3Q86XJ1 694 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 GPR150Q8NGU9 434 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 TRIM43Q96BQ3 446 aaPredicted RBP8.79□□□□□ -1
HMGB3P14-201ENST00000494195 NMD3Q96D46 503 aaKnown RBP8.79□□□□□ -1
HMGB3P14-201ENST00000494195 MESP1Q9BRJ9 268 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 ZNF287Q9HBT7 754 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 SACM1LQ9NTJ5 587 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 AFF4Q9UHB7 1163 aaKnown RBP8.79□□□□□ -1
HMGB3P14-201ENST00000494195 PCDHGB6Q9Y5F9 930 aa8.79□□□□□ -1
HMGB3P14-201ENST00000494195 LRPAP1P30533 357 aa8.78□□□□□ -1
HMGB3P14-201ENST00000494195 FMO1Q01740 532 aa8.78□□□□□ -1
HMGB3P14-201ENST00000494195 COL10A1Q03692 680 aa8.78□□□□□ -1
HMGB3P14-201ENST00000494195 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
HMGB3P14-201ENST00000494195 MS4A7Q9GZW8 240 aaPredicted RBP8.78□□□□□ -1
HMGB3P14-201ENST00000494195 A1CFQ9NQ94 594 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms