RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 HNRNPRO43390 633 aaKnown RBP19.96■□□□□ 0.79
COL27A1-207ENST00000494090 TAF6P49848 677 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 CUL2Q13617 745 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 PTK6Q13882 451 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 AAASQ9NRG9 546 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 FGFR2P21802 821 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 HARS2P49590 506 aaKnown RBP19.96■□□□□ 0.79
COL27A1-207ENST00000494090 GMPSP49915 693 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-207ENST00000494090 KLC1Q07866 573 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 SLC7A14Q8TBB6 771 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 SEPT5Q99719 369 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-207ENST00000494090 PDGFRBP09619 1106 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 PKN3Q6P5Z2 889 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 TASP1Q9H6P5 420 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 LATS2Q9NRM7 1088 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 A0A0A6YYK5 440 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-207ENST00000494090 GIT2Q14161 759 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 NAPEPLDQ6IQ20 393 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 MDM1Q8TC05 714 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 E2F7Q96AV8 911 aa19.96■□□□□ 0.79
COL27A1-207ENST00000494090 SYF2O95926 243 aaKnown RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 USP13Q92995 863 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 ELMO2Q96JJ3 720 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 SPATA16Q9BXB7 569 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 VPS33BQ9H267 617 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 METTL5Q9NRN9 209 aaKnown RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 AURKCQ9UQB9 309 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 B2RBV5 119 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 ZSCAN9O15535 394 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 GRAP2O75791 330 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 ARHGAP15Q53QZ3 475 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 RNF180Q86T96 592 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 NSL1Q96IY1 281 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 TMBIM4Q9HC24 238 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 LRRIQ3A6PVS8 624 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 ZNF263O14978 683 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 STAG3L1P0CL83 205 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 BRD2P25440 801 aaKnown RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 KLRK1P26718 216 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 STIP1P31948 543 aaKnown RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 ALDH1A3P47895 512 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 ARL4DP49703 201 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 SMTNL2Q2TAL5 461 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 SDE2Q6IQ49 451 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 PCYOX1LQ8NBM8 494 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 KLF6Q99612 283 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 THTPAQ9BU02 230 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 TARS2Q9BW92 718 aaKnown RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 CHORDC1Q9UHD1 332 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 FAM32AQ9Y421 112 aaKnown RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 IGF2BP3O00425 579 aaKnown RBP eCLIP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 APOA4P06727 396 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 MGAT5BQ3V5L5 792 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 BOLA3Q53S33 107 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 KDELC2Q7Z4H8 507 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 HOMEZQ8IX15 550 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 TMCO5AQ8N6Q1 288 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 PPP1R36Q96LQ0 422 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 SLIT1O75093 1534 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 SGPL1O95470 568 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 FAM200BP0CF97 657 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 GNL1P36915 607 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-207ENST00000494090 SREBF1P36956 1147 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 LINC00523Q86TU6 105 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 FAM71DQ8N9W8 422 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 TAAR1Q96RJ0 339 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 DEFB129Q9H1M3 183 aa19.95■□□□□ 0.78
COL27A1-207ENST00000494090 GOLGA8TH3BQL2 631 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 ICAM1P05362 532 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 DAB2IPQ5VWQ8 1189 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 LRRC34Q8IZ02 419 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 KIF2BQ8N4N8 673 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 SHCBP1Q8NEM2 672 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 WHRNQ9P202 907 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 TSR3Q9UJK0 312 aaKnown RBP19.94■□□□□ 0.78
COL27A1-207ENST00000494090 RSPH10B2B2RC85 870 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 RSPH10BP0C881 870 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 GZMAP12544 262 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 LRRC8BQ6P9F7 803 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 LACRTQ9GZZ8 138 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 CLCA2Q9UQC9 943 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 PKP3Q9Y446 797 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 CDY2AQ9Y6F7 541 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 CDY1Q9Y6F8 540 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 ZC3H11AO75152 810 aaKnown RBP eCLIP19.94■□□□□ 0.781e-7■□□□□ 11.2
COL27A1-207ENST00000494090 DNAJC9Q8WXX5 260 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 HPDLQ96IR7 371 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 GLT1D1Q96MS3 346 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 C20orf96Q9NUD7 363 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-207ENST00000494090 ZBTB12Q9Y330 459 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-207ENST00000494090 ENO3P13929 434 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-207ENST00000494090 ITIH4Q14624 930 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 SETD3Q86TU7 594 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-207ENST00000494090 MYCBPAPQ8TBZ2 947 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 COLEC11Q9BWP8 271 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 KIAA1257Q9ULG3 409 aa19.94■□□□□ 0.78
COL27A1-207ENST00000494090 PKN1Q16512 942 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 GOLGA7BQ2TAP0 167 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 Q4G0T1 1027 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 PTRHD1Q6GMV3 140 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms