RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SLITRK6Q9H5Y7 841 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 RPF1Q9H9Y2 349 aaKnown RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 PDE11AQ9HCR9 933 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 MRPL47Q9HD33 250 aaKnown RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 SALL4Q9UJQ4 1053 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 AJAP1Q9UKB5 411 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 TFR2Q9UP52 801 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 CNTNAP2Q9UHC6 1331 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 LCTP09848 1927 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CCDC66A2RUB6 948 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 H3BRB1 525 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CYP26A1O43174 497 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 FTCDO95954 541 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 ASS1P00966 412 aaKnown RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CYP1A2P05177 515 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 TMEM191BP0C7N4 346 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 INSRRP14616 1297 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CPB1P15086 417 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 MARK3P27448 753 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 ATICP31939 592 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 SOX18P35713 384 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 SLC1A1P43005 524 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 NSFP46459 744 aaKnown RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 ACOT2P49753 483 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 GABPB1Q06547 395 aaPredicted RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CLEC16AQ2KHT3 1053 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 DCAF4L1Q3SXM0 396 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 HSP90B2PQ58FF3 399 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 OLFML2BQ68BL8 750 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CRELD2Q6UXH1 353 aaPredicted RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 NT5DC3Q86UY8 548 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 RASGEF1CQ8N431 466 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 USP38Q8NB14 1042 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 NOA1Q8NC60 698 aaKnown RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 COG1Q8WTW3 980 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 AFG1LQ8WV93 481 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 TTC9Q92623 222 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 LPIN3Q9BQK8 851 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 NIF3L1Q9GZT8 377 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 TUT1Q9H6E5 874 aaKnown RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 FAM53CQ9NYF3 392 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
PRPF3-206ENST00000493553 L1RE1Q9UN81 338 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 CEP83Q9Y592 693 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 SCINQ9Y6U3 715 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 ARID2Q68CP9 1835 aa10.69□□□□□ -0.7
PRPF3-206ENST00000493553 NRCAMQ92823 1304 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 CEP104O60308 925 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 BUB1BO60566 1050 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PEX10O60683 326 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 SGPL1O95470 568 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 SNAI1O95863 264 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 GNAT1P11488 350 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 CETN2P41208 172 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 CPT1AP50416 773 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 HUNKP57058 714 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 NOP14P78316 857 aaKnown RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 TAP1Q03518 808 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 SREBF2Q12772 1141 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PAK2Q13177 524 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 CUL1Q13616 776 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PERM1Q5SV97 790 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 BEND6Q5SZJ8 279 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 TDRD10Q5VZ19 366 aaKnown RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 CCNI2Q6ZMN8 369 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 NOP9Q86U38 636 aaKnown RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 EFCAB13Q8IY85 973 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 LINC01465Q8N7H1 131 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 OR6J1Q8NGC5 347 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 NLRP4Q96MN2 994 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 POP1Q99575 1024 aaKnown RBP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 KATNAL1Q9BW62 490 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 KATNBL1Q9H079 304 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 MIS12Q9H081 205 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PLEKHA5Q9HAU0 1116 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 CYP3A43Q9HB55 503 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PTPRHQ9HD43 1115 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 MED4Q9NPJ6 270 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 MTUS1Q9ULD2 1270 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 STXBP5LQ9Y2K9 1186 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 DERAQ9Y315 318 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRPF3-206ENST00000493553 TELO2Q9Y4R8 837 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PCDHB4Q9Y5E5 795 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 WDR81Q562E7 1941 aa10.68□□□□□ -0.7
PRPF3-206ENST00000493553 PDE2AO00408 941 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 MAP2K7O14733 419 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF185O15231 689 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 MED7O43513 233 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 NCK2O43639 380 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 MMP20O60882 483 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ERLIN2O94905 339 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 CALB1P05937 261 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 CHRNB2P17787 502 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms