RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 MYL5Q02045 173 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 TDGQ13569 410 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 RAB33AQ14088 237 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 MRPL58Q14197 206 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 SOWAHAQ2M3V2 549 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 SGSM1Q2NKQ1 1148 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 LIN9Q5TKA1 542 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 SPOPLQ6IQ16 392 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 SLC8B1Q6J4K2 584 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 OSTM1Q86WC4 334 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 FBXL13Q8NEE6 735 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 OR10T2Q8NGX3 314 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 ENOX1Q8TC92 643 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 TAF4BQ92750 862 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 NAT10Q9H0A0 1025 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 SMYD3Q9H7B4 428 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 VRTNQ9H8Y1 702 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 DDX43Q9NXZ2 648 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 FBXW11Q9UKB1 542 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 FBXL21Q9UKT6 434 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 MYO10Q9HD67 2058 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 DENND4CQ5VZ89 1909 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 DNAH14Q0VDD8 3507 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 WDR27A2RRH5 827 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 KCNJ18B7U540 433 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 TBC1D4O60343 1298 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 AOC1P19801 751 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 ACAT1P24752 427 aaKnown RBP12.39□□□□□ -0.43
CTSA-209ENST00000493522 MCCD1P59942 119 aaPredicted RBP12.39□□□□□ -0.43
CTSA-209ENST00000493522 TSPY1Q01534 308 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 KCNJ12Q14500 433 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 CWF19L1Q69YN2 538 aaKnown RBP12.39□□□□□ -0.43
CTSA-209ENST00000493522 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 SPATA18Q8TC71 538 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 KBTBD7Q8WVZ9 684 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 PGLYRP2Q96PD5 576 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 TMEM209Q96SK2 561 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
CTSA-209ENST00000493522 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 SNX25Q9H3E2 840 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 SAMSN1Q9NSI8 373 aaKnown RBP12.39□□□□□ -0.43
CTSA-209ENST00000493522 DPP7Q9UHL4 492 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 GVINP1Q7Z2Y8 2422 aa12.39□□□□□ -0.43
CTSA-209ENST00000493522 PRRG1O14668 218 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 HCRTO43612 131 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 LRRN2O75325 713 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 C8AP07357 584 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
CTSA-209ENST00000493522 WARSP23381 471 aaKnown RBP12.38□□□□□ -0.43
CTSA-209ENST00000493522 PCSK1P29120 753 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 ASPAP45381 313 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 LHX1P48742 406 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 CETN1Q12798 172 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 KCNH2Q12809 1159 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 MAN2A1Q16706 1144 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 WDR44Q5JSH3 913 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 CMASQ8NFW8 434 aaPredicted RBP12.38□□□□□ -0.43
CTSA-209ENST00000493522 OR6B3Q8NGW1 331 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 SLC7A14Q8TBB6 771 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 SYT15Q9BQS2 421 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 FUCA2Q9BTY2 467 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 ZCWPW1Q9H0M4 648 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 KCNK12Q9HB15 430 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
CTSA-209ENST00000493522 FRYLO94915 3013 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 NOTCH4Q99466 2003 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 PES1O00541 588 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 P4HA2O15460 535 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 TACC1O75410 805 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 RFPL2O75678 378 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 C1RP00736 705 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 ELF1P32519 619 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 CDR1P51861 262 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 PSMC1P62191 440 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 ADCY1Q08828 1119 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 LRMPQ12912 555 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 PPM1LQ5SGD2 360 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 CYP26C1Q6V0L0 522 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 RNF19BQ6ZMZ0 732 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 SIX5Q8N196 739 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 ZNF461Q8TAF7 563 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 HDAC7Q8WUI4 952 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms