RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, human

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LCOR-208	ENST00000493486	RB1	P06400	928 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CENPB	P07199	599 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	GALT	P07902	379 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	OR52Z1	P0C646	297 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	ARF4	P18085	180 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	AKAP5	P24588	427 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	GJB2	P29033	226 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	POLG	P54098	1239 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	BCAR1	P56945	870 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	LINC00310	P59036	64 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	PTEN	P60484	403 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	PLCB3	Q01970	1234 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	RING1	Q06587	406 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CUL4A	Q13619	759 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	TTC38	Q5R3I4	469 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	SFRP5	Q5T4F7	317 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	NT5DC1	Q5TFE4	455 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CDCA2	Q69YH5	1023 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CPLX2	Q6PUV4	134 aa	Known RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	KCNT2	Q6UVM3	1135 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	USP49	Q70CQ1	688 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	MRPL10	Q7Z7H8	261 aa	Known RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	ZNF410	Q86VK4	478 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	RNF168	Q8IYW5	571 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	MFSD4A	Q8N468	514 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	EFHB	Q8N7U6	833 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	C12orf76	Q8N812	135 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	IGSF22	Q8N9C0	903 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	RNF149	Q8NC42	400 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	UBE2F	Q969M7	185 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CHAMP1	Q96JM3	812 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	SAMD11	Q96NU1	681 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	ALPK1	Q96QP1	1244 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	MAP7D2	Q96T17	732 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	MIPEP	Q99797	713 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	TCF25	Q9BQ70	676 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	C11orf84	Q9BUA3	381 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	POLR3C	Q9BUI4	534 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	APOL5	Q9BWW9	433 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	EMILIN2	Q9BXX0	1053 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	BACH2	Q9BYV9	841 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	HAPLN2	Q9GZV7	340 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	TMEM117	Q9H0C3	514 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	POLR3F	Q9H1D9	316 aa	Predicted RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	FZD8	Q9H461	694 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	ZSWIM4	Q9H7M6	989 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	ATP6V0A4	Q9HBG4	840 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	C1orf112	Q9NSG2	853 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CLDND1	Q9NY35	253 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CACNA2D2	Q9NY47	1150 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	COG5	Q9UP83	839 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	PIN4	Q9Y237	131 aa	Known RBP	3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	IPP	Q9Y573	584 aa		3.84	□□□□□ -1.79
LCOR-208	ENST00000493486	CACNA1H	O95180	2353 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PIEZO1	Q92508	2521 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486		A0A087X0B3	334 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486		A0A1B0GUA9	196 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ARL5C	A6NH57	179 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PI4K2B	G5E9Z4	385 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PTGES	O14684	152 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	INPPL1	O15357	1258 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ADAM12	O43184	909 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	N4BP1	O75113	896 aa	Known RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	CLASP2	O75122	1294 aa	Known RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ZC3H11A	O75152	810 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PAGE1	O75459	146 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	EYA4	O95677	639 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	RPLP2	P05387	115 aa	Known RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	STAG3L1	P0CL83	205 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	MED14OS	P0DP75	135 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	MYB	P10242	640 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	RAC2	P15153	192 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	EPCAM	P16422	314 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	BMP7	P18075	431 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	CYP11B2	P19099	503 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	GLDC	P23378	1020 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	RPA1	P27694	616 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	TMOD1	P28289	359 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	TRHR	P34981	398 aa	Predicted RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	MLH1	P40692	756 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	SCNN1G	P51170	649 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	HK2	P52789	917 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ATP2C1	P98194	919 aa	Predicted RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	DSC1	Q08554	894 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	COASY	Q13057	564 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PKP1	Q13835	747 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	RABEP1	Q15276	862 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PTPN14	Q15678	1187 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	SMAD2	Q15796	467 aa	Known RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	DUSP6	Q16828	381 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	TIGD5	Q53EQ6	642 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ARSH	Q5FYA8	562 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	NOMO2	Q5JPE7	1267 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	RALGPS1	Q5JS13	557 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	ZBTB41	Q5SVQ8	909 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	PLPP4	Q5VZY2	271 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	TWF2	Q6IBS0	349 aa	Known RBP	3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	LLGL2	Q6P1M3	1020 aa		3.83	□□□□□ -1.8
LCOR-208	ENST00000493486	NXPE4	Q6UWF7	544 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms