RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 RFWD2Q8NHY2 731 aa16.99■□□□□ 0.31
BRAT1-206ENST00000493232 PPP1R36Q96LQ0 422 aa16.99■□□□□ 0.31
BRAT1-206ENST00000493232 PJA2O43164 708 aa16.99■□□□□ 0.31
BRAT1-206ENST00000493232 NUP93Q8N1F7 819 aa16.99■□□□□ 0.31
BRAT1-206ENST00000493232 CERKQ8TCT0 537 aa16.99■□□□□ 0.31
BRAT1-206ENST00000493232 KLC4Q9NSK0 619 aa16.99■□□□□ 0.31
BRAT1-206ENST00000493232 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 ZC3H11AO75152 810 aaKnown RBP eCLIP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 LRG1P02750 347 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 COILP38432 576 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 ZNF669Q96BR6 464 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 NAMPTP43490 491 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 NBPF20Q3BBV1 942 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 DBR1Q9UK59 544 aaKnown RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 HOXA2O43364 376 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 SOAT2O75908 522 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 RHOBTB1O94844 696 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 CAP2P40123 477 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 CCNJLQ8IV13 435 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 OTULINQ96BN8 352 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 CCT8L2Q96SF2 557 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 RBBP8Q99708 897 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 PI4K2AQ9BTU6 479 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 CRLS1Q9UJA2 301 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 PPP1R3GB7ZBB8 358 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 AKAP10O43572 662 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 TBC1D4O60343 1298 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 KCNK10P57789 538 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 TMEM132BQ14DG7 1078 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 HIST2H2ACQ16777 129 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 ICE2Q659A1 982 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 HIST2H2AA3Q6FI13 130 aa16.98■□□□□ 0.31
BRAT1-206ENST00000493232 C1orf131Q8NDD1 294 aaKnown RBP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.98■□□□□ 0.31
BRAT1-206ENST00000493232 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 F9P00740 461 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 KRT8P05787 483 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 EPHB2P29323 1055 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ALDH7A1P49419 539 aaKnown RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 LRRC74AQ0VAA2 488 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 AARS2Q5JTZ9 985 aaKnown RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ADNPQ9H2P0 1102 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 STX7O15400 261 aaKnown RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ATMINO43313 823 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 EGFRP00533 1210 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ARMC6Q6NXE6 501 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 RFX8Q6ZV50 586 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 SETD1BQ9UPS6 1966 aaKnown RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 TRPC5OSA6NMA1 111 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 VDRP11473 427 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 CHRM3P20309 590 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 ZNF177Q13360 481 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 CDH18Q13634 790 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 NAA30Q147X3 362 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 FAM83EQ2M2I3 478 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 SMTNL2Q2TAL5 461 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 MROH8Q9H579 483 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 CCDC134Q9H6E4 229 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 NEK2P51955 445 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 GEMIN4P57678 1058 aaKnown RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 TROAPQ12815 778 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 KYNUQ16719 465 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 PRAMEF18Q5VWM3 479 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 HOMEZQ8IX15 550 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 FAM71DQ8N9W8 422 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 E2F7Q96AV8 911 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 FAM167BQ9BTA0 163 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 SENP2Q9HC62 589 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 GARTP22102 1010 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 GCLCP48506 637 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 HPCAP84074 193 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 FAM117BQ6P1L5 589 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 LONP2Q86WA8 852 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 SLC13A5Q86YT5 568 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 CLEC4FQ8N1N0 589 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 PLEKHA8Q96JA3 519 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 TRIM10Q9UDY6 481 aa16.97■□□□□ 0.31
BRAT1-206ENST00000493232 MARCOQ9UEW3 520 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-206ENST00000493232 KLRC1P26715 233 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 SFSWAPQ12872 951 aaKnown RBP16.96■□□□□ 0.31
BRAT1-206ENST00000493232 CYP4A22Q5TCH4 519 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 SAMD7Q7Z3H4 446 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 TMEM169Q96HH4 297 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 WDCPQ9H6R7 721 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 ABI2Q9NYB9 513 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-206ENST00000493232 TMEM120BA0PK00 339 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 FKBP9O95302 570 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 ETFBP38117 255 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 MDH1BQ5I0G3 518 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 MPZL3Q6UWV2 235 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 FKBP9P1Q75LS8 142 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 FAM162AQ96A26 154 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 PHF21AQ96BD5 680 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms