RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PDZD7Q9H5P4 517 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TMEM161AQ9NX61 479 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 NOC2LQ9Y3T9 749 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 SYN3O14994 580 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ECEL1O95672 775 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CD44P16070 742 aaKnown RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 DNAJB2P25686 324 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 GTF2F1P35269 517 aaKnown RBP eCLIP6.61□□□□□ -1.35
NF1-215ENST00000493220 SLC18A3Q16572 532 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ACAD10Q6JQN1 1059 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PCGF5Q86SE9 256 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ACOT1Q86TX2 421 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 RCOR2Q8IZ40 523 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 UCMAQ8WVF2 138 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 TBC1D31Q96DN5 1066 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 MRRFQ96E11 262 aaKnown RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 CISHQ9NSE2 258 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 AP3B1O00203 1094 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 TEX33O43247 280 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ARIH2O95376 493 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 MOCS2O96007 188 aaPredicted RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 IRF1P10914 325 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ARF4P18085 180 aaPredicted RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 IGFBP4P22692 258 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 GARSP41250 739 aaKnown RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 RGS7P49802 495 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ZNF131P52739 623 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SLC12A2P55011 1212 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CDR2Q01850 454 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 C2orf15Q8WU43 125 aaKnown RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 CDKL2Q92772 493 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 TRIM63Q969Q1 353 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SENP8Q96LD8 212 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SLC9A7Q96T83 725 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 KRT12Q99456 494 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ARHGAP28Q9P2N2 729 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 MYH8P13535 1937 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SLC9A1P19634 815 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 AVPR1AP37288 418 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 RAP1GAPP47736 663 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CASP4P49662 377 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 IQCB1Q15051 598 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 AMHR2Q16671 573 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SV2AQ7L0J3 742 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 UBA3Q8TBC4 463 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PARD3BQ8TEW8 1205 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ATRIPQ8WXE1 791 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 IFT43Q96FT9 208 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 DCLK3Q9C098 648 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ASTN1O14525 1302 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ZNF197O14709 1029 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 IFNB1P01574 187 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PDGFRAP16234 1089 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CST5P28325 142 aaPredicted RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 PSMD5Q16401 504 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ECM1Q16610 540 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SLC39A12Q504Y0 691 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ZNF618Q5T7W0 954 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 TRIM59Q8IWR1 403 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SLC7A14Q8TBB6 771 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 UBLCP1Q8WVY7 318 aaPredicted RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CCDC68Q9H2F9 335 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 INSL6Q9Y581 213 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SCN4AP35499 1836 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 TAF1P21675 1872 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 TMEM253P0C7T8 217 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 MYL4P12829 197 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 NCAM1P13591 858 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PAMP19021 973 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 IFNAR2P48551 515 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PSEN1P49768 467 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 NAB2Q15742 525 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 PPP6R3Q5H9R7 873 aaPredicted RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 MMS22LQ6ZRQ5 1243 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CCDC63Q8NA47 563 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 SPATA18Q8TC71 538 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CPA5Q8WXQ8 436 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ZBTB45Q96K62 511 aaPredicted RBP6.61□□□□□ -1.35
NF1-215ENST00000493220 TTPALQ9BTX7 342 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 ARFGAP3Q9NP61 516 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 FAM114A2Q9NRY5 505 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 CALCOCO1Q9P1Z2 691 aa6.61□□□□□ -1.35
NF1-215ENST00000493220 EEF2KO00418 725 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 B4GALT4O60513 344 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 YWHAQP27348 245 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ALDH3A1P30838 453 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ARL1P40616 181 aaPredicted RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 SP2Q02086 613 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 DRP2Q13474 957 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 ATL2Q8NHH9 583 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 TAS1R2Q8TE23 839 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 LPPQ93052 612 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 FAXDC2Q96IV6 333 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms