RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 KLHL11Q9NVR0 708 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 RASAL2Q9UJF2 1139 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 STRIP2Q9ULQ0 834 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PPP2R2CQ9Y2T4 447 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 MAST2Q6P0Q8 1798 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 A0A0U1RQF3 1178 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 FAM237AA0A1B0GTK4 181 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PPEF2O14830 753 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SLC4A1P02730 911 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 MMEP08473 750 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 RALAP11233 206 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF131P52739 623 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 HNRNPH2P55795 449 aaKnown RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 DEFB103AP81534 67 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ZBTB16Q05516 673 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 DUSP4Q13115 394 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PLD1Q13393 1074 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 NR1I3Q14994 352 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 NCAPHQ15003 741 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 DDR2Q16832 855 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 WHAMMP3Q1A5X7 153 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PPM1LQ5SGD2 360 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ICE2Q659A1 982 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ENOSF1Q7L5Y1 443 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CCDC25Q86WR0 208 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF280BQ86YH2 543 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 STKLD1Q8NE28 680 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 IFT81Q8WYA0 676 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SELENOSQ9BQE4 189 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CORO1BQ9BR76 489 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 TMEM161AQ9NX61 479 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CPSF3Q9UKF6 684 aaKnown RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PYCARDQ9ULZ3 195 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 INSL6Q9Y581 213 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ARFGEF1Q9Y6D6 1849 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MCM3APO60318 1980 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 ABHD14A-ACY1A0A1B0GW23 586 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 F5H423 210 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 NRP1O14786 923 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 EFCAB14O75071 495 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 PARNO95453 639 aaKnown RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 PDGFRAP16234 1089 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 SCP2P22307 547 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 HPDP32754 393 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 LHX1P48742 406 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MLLT1Q03111 559 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MCL1Q07820 350 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 ADCY1Q08828 1119 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 FAAP100Q0VG06 881 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 GPM6BQ13491 265 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 PPP1R7Q15435 360 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 NFE2Q16621 373 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 CCDC38Q502W7 563 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 FUT10Q6P4F1 479 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 C1orf228Q6PIY5 440 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 KCNT2Q6UVM3 1135 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 LRRC55Q6ZSA7 311 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 RFX6Q8HWS3 928 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 ELOA2Q8IYF1 753 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 RNF168Q8IYW5 571 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 C1orf127Q8N9H9 656 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 KLHDC9Q8NEP7 349 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 SLC7A14Q8TBB6 771 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MORC4Q8TE76 937 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 GANCQ8TET4 914 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 SLC20A1Q8WUM9 679 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 NSMCE1Q8WV22 266 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 RNF25Q96BH1 459 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 TMEM176AQ96HP8 235 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 TCF25Q9BQ70 676 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.72□□□□□ -1.657e-10■■□□□ 12.3
TRA2B-215ENST00000492417 HEMGNQ9BXL5 484 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 EMILIN2Q9BXX0 1053 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 TSGA10Q9BZW7 698 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 GOLPH3Q9H4A6 298 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MRPL47Q9HD33 250 aaKnown RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 HCSTQ9UBK5 93 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 DNAJB4Q9UDY4 337 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 TSPAN16Q9UKR8 245 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 PCDHB5Q9Y5E4 795 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 LTBP1Q14766 1721 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 ARAP2Q8WZ64 1704 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 DOCK2Q92608 1830 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 TIAM2Q8IVF5 1701 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 IGKV6D-21A0A0A0MT36 114 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 GOLGA8CPA6NN73 597 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 E7EVH7 732 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 F8VP50 259 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 SOAT2O75908 522 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 TIMP1P01033 207 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 CA3P07451 260 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MBL2P11226 248 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-215ENST00000492417 KRT3P12035 628 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MXRA7P84157 204 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 EFEMP1Q12805 493 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 ACCSLQ4AC99 568 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 MARCH8Q5T0T0 291 aa4.72□□□□□ -1.65
TRA2B-215ENST00000492417 C9orf57Q5W0N0 161 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms