RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 ZSCAN18Q8TBC5 510 aaPredicted RBP9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 PARD3BQ8TEW8 1205 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 ATOH1Q92858 354 aaPredicted RBP9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 CGRRF1Q99675 332 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 PRRX2Q99811 253 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 DDX23Q9BUQ8 820 aaKnown RBP9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 XYLT2Q9H1B5 865 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 ATXN3LQ9H3M9 355 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 TRPV4Q9HBA0 871 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 CRTAC1Q9NQ79 661 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 EXOC1Q9NV70 894 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 DLGAP2Q9P1A6 1054 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 MAPK8IP1Q9UQF2 711 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 SIT1Q9Y3P8 196 aa9.56□□□□□ -0.88
COL6A4P1-203ENST00000491915 FAM170BA6NMN3 283 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 PDXKO00764 312 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 WARSP23381 471 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 GDI1P31150 447 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 GNL1P36915 607 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 LHX1P48742 406 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 NUBP1P53384 320 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 CDH8P55286 799 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 CLDN10P78369 228 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 CYP4F8P98187 520 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 TSPY1Q01534 308 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 SMARCB1Q12824 385 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 MYO1EQ12965 1108 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 MLF2Q15773 248 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 GPR158Q5T848 1215 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 DPH6Q7L8W6 267 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 SLC9A9Q8IVB4 645 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 MFSD6LQ8IWD5 586 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 CCDC105Q8IYK2 499 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 ADGRF2Q8IZF7 708 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 ZNF687Q8N1G0 1237 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 SPPL2BQ8TCT7 592 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 C2orf15Q8WU43 125 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 TMEM174Q8WUU8 243 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 FNBP1Q96RU3 617 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 TRMT61BQ9BVS5 477 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 TASP1Q9H6P5 420 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 HEBP1Q9NRV9 189 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 CGNQ9P2M7 1197 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
COL6A4P1-203ENST00000491915 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 LRRIQ3A6PVS8 624 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 RHOBTB3O94955 611 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 VNN1O95497 513 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 NR3C1P04150 777 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 PSMC3P17980 439 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 NLRP12P59046 1061 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 PSMC1P62191 440 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 MYL7Q01449 175 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 BECN1Q14457 450 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 NFE2Q16621 373 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 WDR72Q3MJ13 1102 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 TDRD10Q5VZ19 366 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 TXNDC8Q6A555 127 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 ITIH5Q86UX2 942 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 ENGASEQ8NFI3 743 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 SPATA18Q8TC71 538 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 ERCC4Q92889 916 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 SHDQ96IW2 340 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 ZFYVE19Q96K21 471 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 MMS19Q96T76 1030 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 GPR88Q9GZN0 384 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 SDCBP2Q9H190 292 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 BRD9Q9H8M2 597 aa9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 NXF1Q9UBU9 619 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 MAGED2Q9UNF1 606 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 PTPRZ1P23471 2315 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-203ENST00000491915 SLC38A8A6NNN8 435 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 ARNTLO00327 626 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 TACC1O75410 805 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PRAMEF12O95522 483 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 MYL1P05976 194 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 FAM163BP0C2L3 166 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PTPN1P18031 435 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 BDNFP23560 247 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 TARSP26639 723 aaKnown RBP9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PCSK1P29120 753 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 NUCB2P80303 420 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PFKPQ01813 784 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PRKCQQ04759 706 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 TRPC3Q13507 836 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PNOCQ13519 176 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 ANGPT1Q15389 498 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 TPRG1Q6ZUI0 275 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 SPATA2LQ8IUW3 424 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 SCN4BQ8IWT1 228 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 SMYD4Q8IYR2 804 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 MAML2Q8IZL2 1156 aaPredicted RBP9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 MAB21L3Q8N8X9 362 aa9.53□□□□□ -0.88
COL6A4P1-203ENST00000491915 PJA1Q8NG27 643 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms