RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 RDH13Q8NBN7 331 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 SPATA18Q8TC71 538 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 CSGALNACT1Q8TDX6 532 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 LEO1Q8WVC0 666 aaPredicted RBP8.87□□□□□ -0.99
LSM2-213ENST00000491421 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 FAM3CQ92520 227 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 CLDN23Q96B33 292 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 HPDLQ96IR7 371 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 FNBP1Q96RU3 617 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 MKNK1Q9BUB5 465 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 TASP1Q9H6P5 420 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 IL21Q9HBE4 155 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 ABCB6Q9NP58 842 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 RCOR1Q9UKL0 485 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 NDRG2Q9UN36 371 aaKnown RBP8.87□□□□□ -0.99
LSM2-213ENST00000491421 R4GN57 208 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 COL4A3Q01955 1670 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 TSC2P49815 1807 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 DOCK6Q96HP0 2047 aa8.87□□□□□ -0.99
LSM2-213ENST00000491421 CFAP54Q96N23 3096 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 SHISA7A6NL88 538 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 ARNTLO00327 626 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 GABRDO14764 452 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 CHADO15335 359 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 HCRTO43612 131 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 PRAMEF12O95522 483 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 TNNI1P19237 187 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 GPR15P49685 360 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 KPNA1P52294 538 aaPredicted RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 RPL10AP62906 217 aaKnown RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 CSTF1Q05048 431 aaKnown RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 CYP24A1Q07973 514 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 PSMD6Q15008 389 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 DDR2Q16832 855 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 BMT2Q1RMZ1 405 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 TRAPPC11Q7Z392 1133 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 OSTM1Q86WC4 334 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 SPATA2LQ8IUW3 424 aaPredicted RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 MAML2Q8IZL2 1156 aaPredicted RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 ADSSL1Q8N142 457 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 XXYLT1Q8NBI6 393 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 STKLD1Q8NE28 680 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 CCDC127Q96BQ5 260 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 SPATA32Q96LK8 384 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 MMS19Q96T76 1030 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 PKMYT1Q99640 499 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 CGRRF1Q99675 332 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 SEMA4AQ9H3S1 761 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 EXOC1Q9NV70 894 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 OBP2AQ9NY56 170 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 CGNQ9P2M7 1197 aaKnown RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 GTF3C4Q9UKN8 822 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 FBXO4Q9UKT5 387 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 MAGED2Q9UNF1 606 aaPredicted RBP8.86□□□□□ -0.99
LSM2-213ENST00000491421 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
LSM2-213ENST00000491421 WDR87Q6ZQQ6 2873 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 A0A1B0GVL5 298 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 SLC38A8A6NNN8 435 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 ACTN4O43707 911 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 EXOC3O60645 756 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 LMNAP02545 664 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 CSH1P0DML2 217 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CSH2P0DML3 217 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 PFKFB1P16118 471 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 HMGA1P17096 107 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 WARSP23381 471 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 CMA1P23946 247 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CCNE1P24864 410 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CYP2F1P24903 491 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 DDX6P26196 483 aaKnown RBP eCLIP8.85□□□□□ -0.993e-8■■■■□ 20
LSM2-213ENST00000491421 WEE1P30291 646 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 AVPR1AP37288 418 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 MLLT6P55198 1093 aaPredicted RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 NLRP12P59046 1061 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 PSMC1P62191 440 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 KRT85P78386 507 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 MTAPQ13126 283 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 FZD5Q13467 585 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CCDC142Q17RM4 750 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 KNOP1Q1ED39 458 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 ZNF528Q3MIS6 628 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CFAP221Q4G0U5 840 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 ARHGAP29Q52LW3 1261 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 SDHAF4Q5VUM1 108 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 C1orf228Q6PIY5 440 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 C4orf50Q6ZRC1 276 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 LIMS2Q7Z4I7 341 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 TMEM150AQ86TG1 271 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 SCN4BQ8IWT1 228 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 C12orf56Q8IXR9 622 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CMTM8Q8IZV2 173 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 ZNF687Q8N1G0 1237 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 CELF5Q8N6W0 485 aaKnown RBP8.85□□□□□ -0.99
LSM2-213ENST00000491421 MAB21L3Q8N8X9 362 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 GOLGA5Q8TBA6 731 aa8.85□□□□□ -0.99
LSM2-213ENST00000491421 BPIFB1Q8TDL5 484 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms