RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 ACAP1Q15027 740 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 HADHQ16836 314 aaKnown RBP10.3□□□□□ -0.76
ERCC3-208ENST00000491292 MTERF2Q49AM1 385 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 ATG16L1Q676U5 607 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 NDUFAF2Q8N183 169 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 OLFM3Q96PB7 478 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 GPR88Q9GZN0 384 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
ERCC3-208ENST00000491292 PEX6Q13608 980 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 SH2D4BQ5SQS7 431 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 WDR75Q8IWA0 830 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 RBM15BQ8NDT2 890 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 DCAF4Q8WV16 495 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 WWP1Q9H0M0 922 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 ASCC2Q9H1I8 757 aaPredicted RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 GALNT8Q9NY28 637 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 POLLQ9UGP5 575 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 GRID1Q9ULK0 1009 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 MRPL11Q9Y3B7 192 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 AK5Q9Y6K8 562 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 FRMPD4Q14CM0 1322 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 ZMYM2Q9UBW7 1377 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 NEMP1O14524 444 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 SUPT3HO75486 399 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 CYP1A2P05177 515 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 APRTP07741 180 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 ELK3P41970 407 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 EIF3EP60228 445 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 KRT81Q14533 505 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 FAM71AQ8IYT1 594 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 TRIML2Q8N7C3 387 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 LRGUKQ96M69 825 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 UBE2OQ9C0C9 1292 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 PICK1Q9NRD5 415 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 PIH1D1Q9NWS0 290 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 DDTLA6NHG4 134 aaPredicted RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 H0YIN7 160 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 AIM2O14862 343 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 XPO1O14980 1071 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 HNRNPCL1O60812 293 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 HLA-DRAP01903 254 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 GYS1P13807 737 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 TCF4P15884 667 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 DESP17661 470 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 YWHABP31946 246 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 QARSP47897 775 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 AP1B1Q10567 949 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 ACVR2BQ13705 512 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 LBRQ14739 615 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 EML3Q32P44 896 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 POLNQ7Z5Q5 900 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 NLRX1Q86UT6 975 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 EMC1Q8N766 993 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 PHC3Q8NDX5 983 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 SAR1AQ9NR31 198 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 SMYD2Q9NRG4 433 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 CHCHD3Q9NX63 227 aaKnown RBP10.29□□□□□ -0.76
ERCC3-208ENST00000491292 PCDHB2Q9Y5E7 798 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 SCINQ9Y6U3 715 aa10.29□□□□□ -0.76
ERCC3-208ENST00000491292 CYB561D2O14569 222 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 AVILO75366 819 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 RBP3P10745 1247 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 GLRA2P23416 452 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 CRKP46108 304 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 TFAMQ00059 246 aaKnown RBP10.28□□□□□ -0.76
ERCC3-208ENST00000491292 CCDC15Q0P6D6 951 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 CNGA3Q16281 694 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 KBTBD12Q3ZCT8 623 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 PLEKHG4Q58EX7 1191 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 PPP6R3Q5H9R7 873 aaPredicted RBP10.28□□□□□ -0.76
ERCC3-208ENST00000491292 FOXR2Q6PJQ5 311 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 DENND5BQ6ZUT9 1274 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 PTPRN2Q92932 1015 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 ETNK2Q9NVF9 386 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 WRAP73Q9P2S5 460 aaPredicted RBP10.28□□□□□ -0.76
ERCC3-208ENST00000491292 ZHX2Q9Y6X8 837 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 PEX1O43933 1283 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 GRAP2O75791 330 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 SERPINB2P05120 415 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 STX3Q13277 289 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 RCOR2Q8IZ40 523 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 ECSITQ9BQ95 431 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 GRIP2Q9C0E4 1043 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 VPS11Q9H270 941 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 EBF3Q9H4W6 596 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 TMEM8AQ9HCN3 771 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 PRR5-ARHGAP8B1AHC4 643 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 CFHP08603 1231 aa10.28□□□□□ -0.76
ERCC3-208ENST00000491292 NELFEP18615 380 aaKnown RBP10.28□□□□□ -0.76
ERCC3-208ENST00000491292 CLK2P49760 499 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms