RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 KRT39Q6A163 491 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 DDX42Q86XP3 938 aaKnown RBP eCLIP24.17■■□□□ 1.46
USF3-203ENST00000491165 CCDC26Q8TAB7 109 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 CXorf38Q8TB03 319 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 RSAD1Q9HA92 442 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 GOLGA2P5Q9HBQ8 144 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 C1orf112Q9NSG2 853 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 CACNG4Q9UBN1 327 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 TUBGCP4Q9UGJ1 667 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 MYZAPP0CAP1 466 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 OTOP2Q7RTS6 562 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 USP37Q86T82 979 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 C1orf127Q8N9H9 656 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 IL23AQ9NPF7 189 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 ATXN2Q99700 1313 aaKnown RBP24.16■■□□□ 1.46
USF3-203ENST00000491165 GATMP50440 423 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 SCNN1GP51170 649 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 IKBKEQ14164 716 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 TMEM132DQ14C87 1099 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 EPC2Q52LR7 807 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 SPATS2Q86XZ4 545 aaKnown RBP24.16■■□□□ 1.46
USF3-203ENST00000491165 GLYCTKQ8IVS8 523 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 SIX4Q9UIU6 781 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 DNAJC12Q9UKB3 198 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 GIT1Q9Y2X7 761 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 C2CD2Q9Y426 696 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 FNDC1Q4ZHG4 1894 aaPredicted RBP24.16■■□□□ 1.46
USF3-203ENST00000491165 EOMESO95936 686 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 TMEM253P0C7T8 217 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 MDH1P40925 334 aaKnown RBP24.16■■□□□ 1.46
USF3-203ENST00000491165 MTMR3Q13615 1198 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 DRAP1Q14919 205 aaPredicted RBP24.16■■□□□ 1.46
USF3-203ENST00000491165 SURF1Q15526 300 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 UAP1Q16222 522 aaPredicted RBP24.16■■□□□ 1.46
USF3-203ENST00000491165 FMNL3Q8IVF7 1028 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 MICALL1Q8N3F8 863 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 OLIG1Q8TAK6 271 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 HELQQ8TDG4 1101 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 RFFLQ8WZ73 363 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 PI4K2AQ9BTU6 479 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 TMEM161AQ9NX61 479 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 AMACRQ9UHK6 382 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 COQ4Q9Y3A0 265 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 COL4A6Q14031 1691 aa24.16■■□□□ 1.46
USF3-203ENST00000491165 H0YGN5 161 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 TMEM191BP0C7N4 346 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 KCNE1P15382 129 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 GTF2H1P32780 548 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 CTNNA1P35221 906 aaKnown RBP24.15■■□□□ 1.46
USF3-203ENST00000491165 DEFB103AP81534 67 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 DUOXA2Q1HG44 320 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 ARFGAP2Q8N6H7 521 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 PPP1R10Q96QC0 940 aaKnown RBP24.15■■□□□ 1.46
USF3-203ENST00000491165 NEUROG2Q9H2A3 272 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 TTC7AQ9ULT0 858 aaPredicted RBP24.15■■□□□ 1.46
USF3-203ENST00000491165 INPP5FQ9Y2H2 1132 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 NFS1Q9Y697 457 aa24.15■■□□□ 1.46
USF3-203ENST00000491165 POMCP01189 267 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 CCDC172P0C7W6 258 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 SKIP12755 728 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 IGFBP6P24592 240 aaPredicted RBP24.14■■□□□ 1.46
USF3-203ENST00000491165 FPGSQ05932 587 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 BIRC3Q13489 604 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 SLC35G2Q8TBE7 412 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 CTNNBL1Q8WYA6 563 aaPredicted RBP24.14■■□□□ 1.46
USF3-203ENST00000491165 CHD7Q9P2D1 2997 aa24.14■■□□□ 1.46
USF3-203ENST00000491165 BUB1BO60566 1050 aaPredicted RBP24.14■■□□□ 1.45
USF3-203ENST00000491165 ZNF365Q70YC5 407 aa24.14■■□□□ 1.45
USF3-203ENST00000491165 HACE1Q8IYU2 909 aa24.14■■□□□ 1.45
USF3-203ENST00000491165 RPUSD2Q8IZ73 545 aaKnown RBP24.14■■□□□ 1.45
USF3-203ENST00000491165 PGBD4Q96DM1 585 aa24.14■■□□□ 1.45
USF3-203ENST00000491165 OSGEPQ9NPF4 335 aa24.14■■□□□ 1.45
USF3-203ENST00000491165 PPEF2O14830 753 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 PMM2O15305 246 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 DAPK3O43293 454 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 B4GALT3O60512 393 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 ITGB3P05106 788 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 FBXL13Q8NEE6 735 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 SEC14L1Q92503 715 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 ANKRD36BP1Q96IX9 119 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 SYT11Q9BT88 431 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 INTS2Q9H0H0 1204 aaKnown RBP24.13■■□□□ 1.45
USF3-203ENST00000491165 CENPHQ9H3R5 247 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 ELAC1Q9H777 363 aaKnown RBP24.13■■□□□ 1.45
USF3-203ENST00000491165 DAAM1Q9Y4D1 1078 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 SRRM3A6NNA2 597 aaPredicted RBP24.13■■□□□ 1.45
USF3-203ENST00000491165 TTI1O43156 1089 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 UPP2O95045 317 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 HLA-DRAP01903 254 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 LIG3P49916 1009 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 WDR5P61964 334 aaKnown RBP24.13■■□□□ 1.45
USF3-203ENST00000491165 ZNF844Q08AG5 666 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 NAA35Q5VZE5 725 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 SPOPLQ6IQ16 392 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 FAM114A2Q9NRY5 505 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 RAB20Q9NX57 234 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 CXXC1Q9P0U4 656 aaPredicted RBP24.13■■□□□ 1.45
USF3-203ENST00000491165 HCSTQ9UBK5 93 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 APEX2Q9UBZ4 518 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 UTP11Q9Y3A2 253 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms