RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CPEB1Q9BZB8 566 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 UPF3BQ9BZI7 483 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 WNT8AQ9H1J5 351 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TTC12Q9H892 705 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 IL1RAPL2Q9NP60 686 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GPR108Q9NPR9 543 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 DDX21Q9NR30 783 aaKnown RBP eCLIP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 HELLSQ9NRZ9 838 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TMEM140Q9NV12 185 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ANO10Q9NW15 660 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MOCS1Q9NZB8 636 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CTNNA3Q9UI47 895 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TPCN1Q9ULQ1 816 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MAPRE3Q9UPY8 281 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 RUVBL1Q9Y265 456 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 INSL6Q9Y581 213 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CDY2AQ9Y6F7 541 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 PREX1Q8TCU6 1659 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MAP3K19Q56UN5 1328 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 NPHP3Q7Z494 1330 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 IGSF1Q8N6C5 1336 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 RAD50Q92878 1312 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SBNO1A3KN83 1393 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TMEM94Q12767 1356 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TUBGCP6Q96RT7 1819 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 POGZQ7Z3K3 1410 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 A2ML1A8K2U0 1454 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 COL4A3Q01955 1670 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 GRM8O00222 908 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 NEMP1O14524 444 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 RNMTO43148 476 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 PFKFB2O60825 505 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CDKL5O76039 1030 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 MAP4K4O95819 1239 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 LMNAP02545 664 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TUBBP07437 444 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 SKILP12757 684 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 POU3F2P20265 443 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TGM1P22735 817 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CMA1P23946 247 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 PTH2RP49190 550 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TPM4P67936 248 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 MEF2AQ02078 507 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 GABPB1Q06547 395 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 FAPQ12884 760 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 MPP3Q13368 585 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 UBXN2BQ14CS0 331 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 IQCB1Q15051 598 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 PDCD1Q15116 288 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ZRSR1Q15695 479 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CAMK4Q16566 473 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ADCK5Q3MIX3 580 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ANO6Q4KMQ2 910 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 C1orf141Q5JVX7 400 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 METTL24Q5JXM2 366 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 MFSD14BQ5SR56 506 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TEX35Q5T0J7 233 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 C1QL3Q5VWW1 255 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 NAIF1Q69YI7 327 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ZSCAN25Q6NSZ9 544 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF529Q6P280 563 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 PGM2L1Q6PCE3 622 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 BTNL9Q6UXG8 535 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 SYNE3Q6ZMZ3 975 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 UBE3BQ7Z3V4 1068 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 RD3Q7Z3Z2 195 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 AACSQ86V21 672 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF575Q86XF7 245 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ADGRG3Q86Y34 549 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 MAPKAPK5Q8IW41 473 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC83Q8IWF9 413 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CCAR1Q8IX12 1150 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 RHOT1Q8IXI2 618 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TMTC2Q8N394 836 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 NECAB1Q8N987 351 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 SPC24Q8NBT2 197 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ENGASEQ8NFI3 743 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC35B2Q8TB61 432 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF384Q8TF68 577 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CHAC2Q8WUX2 184 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 NELL1Q92832 810 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CEP95Q96GE4 821 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 AHCYL2Q96HN2 611 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 PGBD1Q96JS3 809 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 BPIFA3Q9BQP9 254 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 HEPHQ9BQS7 1158 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ZSWIM1Q9BR11 485 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ORAI3Q9BRQ5 295 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 DUSP26Q9BV47 211 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 AGXT2Q9BYV1 514 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC8Q9H0W5 538 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 OSBPL5Q9H0X9 879 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 BOLA2Q9H3K6 86 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TOR3AQ9H497 397 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CLSTN2Q9H4D0 955 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 GSTO2Q9H4Y5 243 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 CAAP1Q9H8G2 361 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 IFT122Q9HBG6 1241 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 DACT1Q9NYF0 836 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms