RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TRAK2O60296 914 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 EGFP01133 1207 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 F11P03951 625 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 HMGA1P17096 107 aaKnown RBP22.29■■□□□ 1.16
CLIP2-208ENST00000491075 NMT1P30419 496 aaKnown RBP22.29■■□□□ 1.16
CLIP2-208ENST00000491075 PDGFRLQ15198 375 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 ELF2Q15723 593 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 PLK5Q496M5 336 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 MCTP1Q6DN14 999 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 LRRTM3Q86VH5 581 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 MRPS31Q92665 395 aaKnown RBP22.29■■□□□ 1.16
CLIP2-208ENST00000491075 SMOC1Q9H4F8 434 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 PCDHB5Q9Y5E4 795 aa22.29■■□□□ 1.16
CLIP2-208ENST00000491075 KCNK5O95279 499 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 ARSAP15289 507 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 ACOT2P49753 483 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 ZNF268Q14587 947 aaPredicted RBP22.28■■□□□ 1.16
CLIP2-208ENST00000491075 SV2CQ496J9 727 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 WSCD1Q658N2 575 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 RNF43Q68DV7 783 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 AK8Q96MA6 479 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 HHIPQ96QV1 700 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 DPP3Q9NY33 737 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 NUP205Q92621 2012 aa22.28■■□□□ 1.16
CLIP2-208ENST00000491075 SEC24BO95487 1268 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 CSH1P0DML2 217 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 CSH2P0DML3 217 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 GTF2BQ00403 316 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 POU5F1Q01860 360 aaKnown RBP22.27■■□□□ 1.16
CLIP2-208ENST00000491075 TXNDC8Q6A555 127 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 SYT13Q7L8C5 426 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 MON1AQ86VX9 555 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 CPA6Q8N4T0 437 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 CALML4Q96GE6 196 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 P2RY13Q9BPV8 354 aa22.27■■□□□ 1.16
CLIP2-208ENST00000491075 DUSP15Q9H1R2 295 aaPredicted RBP22.27■■□□□ 1.16
CLIP2-208ENST00000491075 HELZP42694 1942 aaKnown RBP22.26■■□□□ 1.15
CLIP2-208ENST00000491075 RHOBTB1O94844 696 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 APBB3O95704 486 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 GALK1P51570 392 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 TSPY1Q01534 308 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 NFE2Q16621 373 aaPredicted RBP22.26■■□□□ 1.15
CLIP2-208ENST00000491075 ADALQ6DHV7 355 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 SLFN12LQ6IEE8 588 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 RPLP0P6Q8NHW5 317 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 RIN3Q8TB24 985 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 ACDQ96AP0 544 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 ZNF560Q96MR9 790 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 EDEM2Q9BV94 578 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 FBRSL1Q9HCM7 1045 aaKnown RBP22.26■■□□□ 1.15
CLIP2-208ENST00000491075 UXTQ9UBK9 157 aaPredicted RBP22.26■■□□□ 1.15
CLIP2-208ENST00000491075 EBF1Q9UH73 591 aa22.26■■□□□ 1.15
CLIP2-208ENST00000491075 ANAPC1Q9H1A4 1944 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 KPNA7A9QM74 516 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 TBCAO75347 108 aaKnown RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 KRT18P05783 430 aaKnown RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 GJA4P35212 333 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 DHX8Q14562 1220 aaKnown RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 MTF1Q14872 753 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 TCEAL6Q6IPX3 200 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 PSAPL1Q6NUJ1 521 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 LEO1Q8WVC0 666 aaPredicted RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 TCEAL3Q969E4 200 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 FIZ1Q96SL8 496 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 ZHX3Q9H4I2 956 aa22.25■■□□□ 1.15
CLIP2-208ENST00000491075 POLR3BQ9NW08 1133 aaPredicted RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 AGO2Q9UKV8 859 aaKnown RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 MAGED2Q9UNF1 606 aaPredicted RBP22.25■■□□□ 1.15
CLIP2-208ENST00000491075 ANKRD63C9JTQ0 380 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 PRPF40AO75400 957 aaKnown RBP22.24■■□□□ 1.15
CLIP2-208ENST00000491075 UBA7P41226 1012 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 PNPLA4P41247 253 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 FAM160A1Q05DH4 1040 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 DMC1Q14565 340 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 NT5DC4Q86YG4 428 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 CD101Q93033 1021 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 ATP2A3Q93084 1043 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 TRMT2BQ96GJ1 504 aaKnown RBP22.24■■□□□ 1.15
CLIP2-208ENST00000491075 PI4K2AQ9BTU6 479 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 TMEM206Q9H813 350 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 ECT2Q9H8V3 914 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 ABCB6Q9NP58 842 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 BLOC1S4Q9NUP1 217 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 STYXL1Q9Y6J8 313 aa22.24■■□□□ 1.15
CLIP2-208ENST00000491075 BCLAF3A2AJT9 711 aaKnown RBP22.23■■□□□ 1.15
CLIP2-208ENST00000491075 IL18RAPO95256 599 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 CAVIN2O95810 425 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 NEFLP07196 543 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 PROS1P07225 676 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 GPR15P49685 360 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 RPL10AP62906 217 aaKnown RBP22.23■■□□□ 1.15
CLIP2-208ENST00000491075 CREB5Q02930 508 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 ZNF77Q15935 545 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 NAIF1Q69YI7 327 aaPredicted RBP22.23■■□□□ 1.15
CLIP2-208ENST00000491075 EFCAB13Q8IY85 973 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 STKLD1Q8NE28 680 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 CCDC26Q8TAB7 109 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 LRRC15Q8TF66 581 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 OSCP1Q8WVF1 389 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 ST6GALNAC4Q9H4F1 302 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms