RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 LMBRD2Q68DH5 695 aaPredicted RBP14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 GALNT17Q6IS24 598 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 PIK3AP1Q6ZUJ8 805 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 TMPRSS7Q7RTY8 843 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 USP37Q86T82 979 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 HMGB4Q8WW32 186 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 ACAP3Q96P50 834 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 OXCT2Q9BYC2 517 aaPredicted RBP14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 BCCIPQ9P287 314 aaKnown RBP eCLIP14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 PCDHA12Q9UN75 941 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 XRCC6P12956 609 aaKnown RBP eCLIP14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 ITPKBP27987 946 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 MYBPC2Q14324 1141 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 KRT32Q14532 448 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 MTF1Q14872 753 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 TAF12Q16514 161 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 MGAT5BQ3V5L5 792 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 OVOS1Q6IE37 1185 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 SFTPA1Q8IWL2 248 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 ALLCQ8N6M5 410 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 CCDC26Q8TAB7 109 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 OSCP1Q8WVF1 389 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 NACC1Q96RE7 527 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 PTPRHQ9HD43 1115 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 STK24Q9Y6E0 443 aa14.89□□□□□ -0.03
EXOSC3-207ENST00000490516 MYO18AQ92614 2054 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 FAM205CA6NFA0 338 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 SGK1O00141 431 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 ARHGAP6O43182 974 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 AP5Z1O43299 807 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 DEXIO95424 95 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 F11P03951 625 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 SYPP08247 313 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 SPATA31C1P0DKV0 1188 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 OPRD1P41143 372 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 IFNAR2P48551 515 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 EFNA5P52803 228 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 NLRP12P59046 1061 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 RPL6Q02878 288 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 EML3Q32P44 896 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 EARS2Q5JPH6 523 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 TXNDC5Q8NBS9 432 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 OXER1Q8TDS5 423 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 ATP2A3Q93084 1043 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 HNRNPABQ99729 332 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 ACO2Q99798 780 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 PRORYQ9H606 182 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 ZMYM5Q9UJ78 669 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 ANAPC1Q9H1A4 1944 aa14.88□□□□□ -0.03
EXOSC3-207ENST00000490516 K7ERI5 159 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 CBFA2T3O75081 653 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 KLF8O95600 359 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 HARSP12081 509 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 TUFMP49411 452 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 ZNF33AQ06730 810 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 SPAG1Q07617 926 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 DMP1Q13316 513 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 ZNF268Q14587 947 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 PPP2R5AQ15172 486 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 ZNF77Q15935 545 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 SEZ6Q53EL9 994 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 ARMCX5Q6P1M9 558 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 PADI6Q6TGC4 694 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 DSTYKQ6XUX3 929 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 GLRX5Q86SX6 157 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 EFCAB13Q8IY85 973 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 PGBD3Q8N328 593 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 NAP1L4Q99733 375 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 LINC00597Q9H2U6 94 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 TTC12Q9H892 705 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 ZDHHC4Q9NPG8 344 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 KIAA1522Q9P206 1035 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 HSFX1Q9UBD0 423 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 PCOLCE2Q9UKZ9 415 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 UNC79Q9P2D8 2635 aa14.87□□□□□ -0.03
EXOSC3-207ENST00000490516 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 PTPRQQ9UMZ3 2332 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 FAM149AA5PLN7 773 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 PYCARD-AS1I3L0S3 204 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 HMGA1P17096 107 aaKnown RBP14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 CYP11B2P19099 503 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 DDX6P26196 483 aaKnown RBP eCLIP14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 TIE1P35590 1138 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 AARSP49588 968 aaKnown RBP eCLIP14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 MRPS21P82921 87 aaKnown RBP14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 CAMK2BQ13554 666 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 BYSLQ13895 437 aaKnown RBP14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 SLC10A6Q3KNW5 377 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 EMC10Q5UCC4 262 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 RABEPKQ7Z6M1 372 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 MON1AQ86VX9 555 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 CATSPER3Q86XQ3 398 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 IL17RCQ8NAC3 791 aa14.86□□□□□ -0.03
EXOSC3-207ENST00000490516 LSM14AQ8ND56 463 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms