RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 FAM167AQ96KS9 214 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 RIPOR3Q96MK2 946 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 C1orf43Q9BWL3 253 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 GLIS2Q9BZE0 524 aaPredicted RBP5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 EPC1Q9H2F5 836 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 ZNF287Q9HBT7 754 aa5.86□□□□□ -1.47
SSX2IP-208ENST00000490476 ADGRB1O14514 1584 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 NCOR2Q9Y618 2525 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 PTPRZ1P23471 2315 aaPredicted RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 ADGRF5Q8IZF2 1346 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 TCAF2A6NFQ2 919 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 RASA4BC9J798 803 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 RASA4O43374 803 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 SASH1O94885 1247 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 AHSGP02765 367 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 JUNP05412 331 aaKnown RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 CD1AP06126 327 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 PHKA1P46020 1223 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 ATP8B2P98198 1209 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 CREMQ03060 361 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 MTM1Q13496 603 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 ZRSR2Q15696 482 aaKnown RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 VMACQ2NL98 169 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 VWA3BQ502W6 1294 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 ZMAT1Q5H9K5 638 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 FAM83BQ5T0W9 1011 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 AFMIDQ63HM1 303 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 PDZD4Q76G19 769 aaPredicted RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 RALYLQ86SE5 291 aaKnown RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 TDHQ8IZJ6 230 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 GPC2Q8N158 579 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 KLHL36Q8N4N3 616 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 BRIX1Q8TDN6 353 aaKnown RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 LPPQ93052 612 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 PHKBQ93100 1093 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 SGCZQ96LD1 299 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 CDX2Q99626 313 aaPredicted RBP5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 PTPN18Q99952 460 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 POGKQ9P215 609 aa5.85□□□□□ -1.47
SSX2IP-208ENST00000490476 NFAT5O94916 1531 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ZNF609O15014 1411 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 PIK3C2GO75747 1445 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ABHD14A-ACY1A0A1B0GW23 586 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 F2RL2O00254 374 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 VSIG10L2P0DP72 767 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 NPR1P16066 1061 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 GLDCP23378 1020 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 TNFSF4P23510 183 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ALDH1A3P47895 512 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 TM4SF4P48230 202 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 SUMO3P55854 103 aaPredicted RBP5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 CTXN1P60606 82 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 APBA1Q02410 837 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ZNF568Q3ZCX4 644 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ANO1Q5XXA6 986 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 USP50Q70EL3 339 aaPredicted RBP5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ARHGEF25Q86VW2 580 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 CARFQ8N187 725 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 CCDC33Q8N5R6 958 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 PCSK9Q8NBP7 692 aaKnown RBP5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ADAMTS17Q8TE56 1095 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 MYOCQ99972 504 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 GDF15Q99988 308 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 SLC6A15Q9H2J7 730 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 WDCPQ9H6R7 721 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 CPNE7Q9UBL6 633 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 ADAM29Q9UKF5 820 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 NR2E1Q9Y466 385 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 RGPD2P0DJD1 1756 aa5.84□□□□□ -1.47
SSX2IP-208ENST00000490476 MRC1P22897 1456 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 USP24Q9UPU5 2620 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF831Q5JPB2 1677 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 POM121BA6NF01 834 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 NT5C1B-RDH14C9J2C7 533 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 RFXAPO00287 272 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 NRP1O14786 923 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 FFAR3O14843 346 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 KIAA0391O15091 583 aaKnown RBP5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 ARHGAP6O43182 974 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 NCK2O43639 380 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 TCEA3O75764 348 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 PRDX5P30044 214 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 STT3AP46977 705 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 KCNJ5P48544 419 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 ADCY7P51828 1080 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 FMO1Q01740 532 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 EXOSC9Q06265 439 aaKnown RBP5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 CNGA2Q16280 664 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 FAM209BQ5JX69 171 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 MFSD14BQ5SR56 506 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF572Q7Z3I7 529 aaPredicted RBP5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 C2CD5Q86YS7 1000 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 CMTM4Q8IZR5 234 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 OR2C3Q8N628 320 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 DCBLD1Q8N8Z6 715 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 POF1BQ8WVV4 589 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 ANKS1AQ92625 1134 aa5.83□□□□□ -1.48
SSX2IP-208ENST00000490476 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms