RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ADAMTS19Q8TE59 1207 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 SMG7Q92540 1137 aaKnown RBP8.4□□□□□ -1.07
SSR1-210ENST00000489567 TAF4BQ92750 862 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 TWNKQ96RR1 684 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 SYT15Q9BQS2 421 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 BCO2Q9BYV7 579 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 THAP9Q9H5L6 903 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 ANO10Q9NW15 660 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.07
SSR1-210ENST00000489567 CEP72Q9P209 647 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 DPP7Q9UHL4 492 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 NFE2L3Q9Y4A8 694 aa8.4□□□□□ -1.07
SSR1-210ENST00000489567 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.4□□□□□ -1.07
SSR1-210ENST00000489567 SYCE3A1L190 88 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 N4BP1O75113 896 aaKnown RBP8.39□□□□□ -1.07
SSR1-210ENST00000489567 FGFR1OPO95684 399 aaKnown RBP8.39□□□□□ -1.07
SSR1-210ENST00000489567 HNRNPA1P09651 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
SSR1-210ENST00000489567 PCSK1P29120 753 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 GPR15P49685 360 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 TSPY1Q01534 308 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 ZP2Q05996 745 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 TWF1Q12792 350 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 LRMPQ12912 555 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 NCAPHQ15003 741 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 TPD52L1Q16890 204 aaPredicted RBP8.39□□□□□ -1.07
SSR1-210ENST00000489567 ANO6Q4KMQ2 910 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
SSR1-210ENST00000489567 ATAT1Q5SQI0 421 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 CCDC149Q6ZUS6 474 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 GRASPQ7Z6J2 395 aaPredicted RBP8.39□□□□□ -1.07
SSR1-210ENST00000489567 STKLD1Q8NE28 680 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 IMPG2Q9BZV3 1241 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 NIF3L1Q9GZT8 377 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 HSD3B7Q9H2F3 369 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 SNX25Q9H3E2 840 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 DNMT3BQ9UBC3 853 aaKnown RBP8.39□□□□□ -1.07
SSR1-210ENST00000489567 CDH9Q9ULB4 789 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 YIPF1Q9Y548 306 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 DOCK6Q96HP0 2047 aa8.39□□□□□ -1.07
SSR1-210ENST00000489567 A8MXQ7 604 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 PMM2O15305 246 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 AFPP02771 609 aaKnown RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 FAM163BP0C2L3 166 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 PTPN1P18031 435 aaKnown RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 ATF6P18850 670 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CD58P19256 250 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CYP2F1P24903 491 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MTHFRP42898 656 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 NDST1P52848 882 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 APBA1Q02410 837 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MGAT5BQ3V5L5 792 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MDH1BQ5I0G3 518 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 SDHAF4Q5VUM1 108 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CDKAL1Q5VV42 579 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 ELMSAN1Q6PJG2 1045 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 ACOT1Q86TX2 421 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 DCP1BQ8IZD4 617 aaKnown RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 B3GALNT2Q8NCR0 500 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 KAT5Q92993 513 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MYLPFQ96A32 169 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 PCED1BQ96HM7 432 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 RIPOR3Q96MK2 946 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 SEPT5Q99719 369 aaPredicted RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 PHF7Q9BWX1 381 aaPredicted RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 COL25A1Q9BXS0 654 aaPredicted RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 WDR6Q9NNW5 1121 aaKnown RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 TMEM30AQ9NV96 361 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 FANCLQ9NW38 375 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 KCNJ18B7U540 433 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CLDN5O00501 218 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 LRG1P02750 347 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 HAPLN1P10915 354 aaPredicted RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 P4HA1P13674 534 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CCR2P41597 374 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MTIF2P46199 727 aaKnown RBP8.38□□□□□ -1.07
SSR1-210ENST00000489567 CACNA2D1P54289 1103 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 INCA1Q0VD86 236 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 KCNJ12Q14500 433 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 SLC5A9Q2M3M2 681 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 TCP11X2Q5H9J9 407 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 PAQR9Q6ZVX9 377 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 RTL10Q7L3V2 364 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 ARHGEF19Q8IW93 802 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 ADHFE1Q8IWW8 467 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 C12orf29Q8N999 325 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 ITFG1Q8TB96 612 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MYCBPAPQ8TBZ2 947 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 SPPL2BQ8TCT7 592 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 TUBGCP2Q9BSJ2 902 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 CRACR2AQ9BSW2 395 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 B3GNT5Q9BYG0 378 aa8.38□□□□□ -1.07
SSR1-210ENST00000489567 MAFFQ9ULX9 164 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms