RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 TRIM9Q9C026 710 aa21.6■■□□□ 1.05
CACFD1-205ENST00000489519 KIAA1586Q9HCI6 787 aa21.6■■□□□ 1.05
CACFD1-205ENST00000489519 DDX43Q9NXZ2 648 aaKnown RBP21.6■■□□□ 1.05
CACFD1-205ENST00000489519 L1RE1Q9UN81 338 aa21.6■■□□□ 1.05
CACFD1-205ENST00000489519 DCHS1Q96JQ0 3298 aa21.6■■□□□ 1.05
CACFD1-205ENST00000489519 ZNF233A6NK53 670 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 SPECC1L-ADORA2AF8WAN1 911 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 CUTAO60888 179 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 PRPF40AO75400 957 aaKnown RBP21.59■■□□□ 1.05
CACFD1-205ENST00000489519 PRAMEF12O95522 483 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 CSH1P0DML2 217 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 CSH2P0DML3 217 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 DDX6P26196 483 aaKnown RBP eCLIP21.59■■□□□ 1.05
CACFD1-205ENST00000489519 LHX1P48742 406 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 NLRP12P59046 1061 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 RPL10AP62906 217 aaKnown RBP21.59■■□□□ 1.05
CACFD1-205ENST00000489519 MYO1EQ12965 1108 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 E2F4Q16254 413 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 CMTM8Q8IZV2 173 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 TOP6BLQ8N6T0 577 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 SECISBP2LQ93073 1101 aaKnown RBP21.59■■□□□ 1.05
CACFD1-205ENST00000489519 ANKRD36BP1Q96IX9 119 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 PI4K2AQ9BTU6 479 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 EPC1Q9H2F5 836 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 TMLHEQ9NVH6 421 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 NCDNQ9UBB6 729 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 SNX9Q9Y5X1 595 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 GPR179Q6PRD1 2367 aa21.59■■□□□ 1.05
CACFD1-205ENST00000489519 F11P03951 625 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 HMGA1P17096 107 aaKnown RBP21.58■■□□□ 1.05
CACFD1-205ENST00000489519 PCSK1P29120 753 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 CTHP32929 405 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 AVPR1AP37288 418 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 CXCL12P48061 93 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 DUOXA2Q1HG44 320 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 INTS6LQ5JSJ4 861 aaKnown RBP21.58■■□□□ 1.05
CACFD1-205ENST00000489519 DGKKQ5KSL6 1271 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 CNNM4Q6P4Q7 775 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 DPH6Q7L8W6 267 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 SPEM1Q8N4L4 309 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 DCLK2Q8N568 766 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 GPR161Q8N6U8 529 aaKnown RBP21.58■■□□□ 1.05
CACFD1-205ENST00000489519 SNX21Q969T3 373 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 ZFYVE19Q96K21 471 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 MTMR12Q9C0I1 747 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 INTS13Q9NVM9 706 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 GTSE1Q9NYZ3 720 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 SIX4Q9UIU6 781 aa21.58■■□□□ 1.05
CACFD1-205ENST00000489519 DENND4CQ5VZ89 1909 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 GABRDO14764 452 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 EIF3DO15371 548 aaKnown RBP eCLIP21.57■■□□□ 1.04
CACFD1-205ENST00000489519 TNNC2P02585 160 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 TDGF1P13385 188 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 ASIC1P78348 528 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 ITPRIPL2Q3MIP1 535 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 TMEM150AQ86TG1 271 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 ADGRF2Q8IZF7 708 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 MRPS31Q92665 395 aaKnown RBP21.57■■□□□ 1.04
CACFD1-205ENST00000489519 DHX58Q96C10 678 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 UXTQ9UBK9 157 aaPredicted RBP21.57■■□□□ 1.04
CACFD1-205ENST00000489519 GTF3C4Q9UKN8 822 aa21.57■■□□□ 1.04
CACFD1-205ENST00000489519 SOX9P48436 509 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 SOWAHAQ2M3V2 549 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 MAB21L3Q8N8X9 362 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 GLIS3Q8NEA6 775 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 ZNF507Q8TCN5 953 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 HPS3Q969F9 1004 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 FUBP3Q96I24 572 aaKnown RBP eCLIP21.56■■□□□ 1.04
CACFD1-205ENST00000489519 HPDLQ96IR7 371 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 PKMYT1Q99640 499 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 MAGEF1Q9HAY2 307 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 TDP1Q9NUW8 608 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 HSPBP1Q9NZL4 362 aa21.56■■□□□ 1.04
CACFD1-205ENST00000489519 MAGED2Q9UNF1 606 aaPredicted RBP21.56■■□□□ 1.04
CACFD1-205ENST00000489519 SMG5Q9UPR3 1016 aaKnown RBP21.56■■□□□ 1.04
CACFD1-205ENST00000489519 ZNF638Q14966 1978 aaKnown RBP21.56■■□□□ 1.04
CACFD1-205ENST00000489519 ACAT1P24752 427 aaKnown RBP21.55■■□□□ 1.04
CACFD1-205ENST00000489519 CYP2F1P24903 491 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 HOXD13P35453 343 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 SNRPFP62306 86 aaKnown RBP21.55■■□□□ 1.04
CACFD1-205ENST00000489519 DDR2Q16832 855 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 CFAP221Q4G0U5 840 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 SCARA3Q6AZY7 606 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 TXNDC11Q6PKC3 985 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 SHC4Q6S5L8 630 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 EPM2AIP1Q7L775 607 aaPredicted RBP21.55■■□□□ 1.04
CACFD1-205ENST00000489519 MON1AQ86VX9 555 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 CBWD2Q8IUF1 395 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 SPATA2LQ8IUW3 424 aaPredicted RBP21.55■■□□□ 1.04
CACFD1-205ENST00000489519 WDR49Q8IV35 697 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 SYNPOQ8N3V7 929 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 TTC8Q8TAM2 541 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 TRMT2BQ96GJ1 504 aaKnown RBP21.55■■□□□ 1.04
CACFD1-205ENST00000489519 FAM84AQ96KN4 292 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 MYRFLQ96LU7 910 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 C7orf25Q9BPX7 421 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 SMG9Q9H0W8 520 aaKnown RBP21.55■■□□□ 1.04
CACFD1-205ENST00000489519 KIF9Q9HAQ2 790 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 GKN1Q9NS71 199 aa21.55■■□□□ 1.04
CACFD1-205ENST00000489519 NOL4O94818 638 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms