RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 MSANTD3Q96H12 275 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 C8orf33Q9H7E9 229 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-206ENST00000489451 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-206ENST00000489451 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 DSEQ9UL01 958 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 L1RE1Q9UN81 338 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 PTPRDP23468 1912 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 ATG2BQ96BY7 2078 aa12.68□□□□□ -0.38
ACTN4-206ENST00000489451 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 ITGB3P05106 788 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 POLR2BP30876 1174 aaKnown RBP12.67□□□□□ -0.38
ACTN4-206ENST00000489451 TUFMP49411 452 aaKnown RBP12.67□□□□□ -0.38
ACTN4-206ENST00000489451 KPNA1P52294 538 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-206ENST00000489451 NLRP12P59046 1061 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 ARHGAP29Q52LW3 1261 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 NAIF1Q69YI7 327 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-206ENST00000489451 TRIM68Q6AZZ1 485 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 RALGPS2Q86X27 583 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-206ENST00000489451 YAF2Q8IY57 180 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 CMTM8Q8IZV2 173 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-206ENST00000489451 USP28Q96RU2 1077 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 FAM213AQ9BRX8 229 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 OLFML3Q9NRN5 406 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 LAMA1P25391 3075 aa12.67□□□□□ -0.38
ACTN4-206ENST00000489451 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 IL18RAPO95256 599 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 FGF19O95750 216 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 PROS1P07225 676 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 PDCP20941 246 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 SYT1P21579 422 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 CDC25CP30307 473 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 ABCD1P33897 745 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 NRLP54845 237 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 CEBPZQ03701 1054 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 SPEM2Q0P670 501 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 SV2CQ496J9 727 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 ARHGAP15Q53QZ3 475 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 CELF5Q8N6W0 485 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 MAB21L3Q8N8X9 362 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 C2orf15Q8WU43 125 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 MRPL44Q9H9J2 332 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 POLR3BQ9NW08 1133 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 SEL1LQ9UBV2 794 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 MORC2Q9Y6X9 1032 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
ACTN4-206ENST00000489451 RALGAPA1Q6GYQ0 2036 aa12.66□□□□□ -0.38
ACTN4-206ENST00000489451 DPYSL4O14531 572 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 EXTL3O43909 919 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 GCNT3O95395 438 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 ARSAP15289 507 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 CYP2F1P24903 491 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 HOXD13P35453 343 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 LRRC32Q14392 662 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 DGKKQ5KSL6 1271 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 TXNDC8Q6A555 127 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 C1orf228Q6PIY5 440 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 LIMS2Q7Z4I7 341 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 METTL23Q86XA0 190 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 THEM5Q8N1Q8 247 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 NETO1Q8TDF5 533 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 EZH1Q92800 747 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 HPS3Q969F9 1004 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 ZNF560Q96MR9 790 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 ACCSQ96QU6 501 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 PANK2Q9BZ23 570 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 EBF3Q9H4W6 596 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 FBRSL1Q9HCM7 1045 aaKnown RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 PDE11AQ9HCR9 933 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 RBAKQ9NYW8 714 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-206ENST00000489451 ZMIZ1Q9ULJ6 1067 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 NME7Q9Y5B8 376 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.38
ACTN4-206ENST00000489451 GABRDO14764 452 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms