RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 FGF11Q92914 225 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 SEPT5Q99719 369 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-233ENST00000489352 POLR3FQ9H1D9 316 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-233ENST00000489352 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 GAREM1Q9H706 876 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-233ENST00000489352 PCDHB8Q9UN66 801 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 FLNCQ14315 2725 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 ZBTB39O15060 712 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 TNFSF14O43557 240 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 SOAT2O75908 522 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 TDP2O95551 362 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 GP1BBP13224 206 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 MATKP42679 507 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 TUFMP49411 452 aaKnown RBP12.58□□□□□ -0.4
HDAC6-233ENST00000489352 SOX4Q06945 474 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-233ENST00000489352 KCNH2Q12809 1159 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 GPR17Q13304 367 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 PPP2R5CQ13362 524 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 MTF1Q14872 753 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 FAM187BQ17R55 369 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 ARMCX5Q6P1M9 558 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 DHRS13Q6UX07 377 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 TPH2Q8IWU9 490 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 ETNPPLQ8TBG4 499 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 CCDC94Q9BW85 323 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-233ENST00000489352 SEMA4CQ9C0C4 833 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 C2orf40Q9H1Z8 148 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 CRISPLD1Q9H336 500 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 FZD8Q9H461 694 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 RGL1Q9NZL6 768 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
HDAC6-233ENST00000489352 MYLKQ15746 1914 aa12.58□□□□□ -0.4
HDAC6-233ENST00000489352 NOTCH2Q04721 2471 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 MYMKA6NI61 221 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 OR6C75A6NL08 312 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 SGK1O00141 431 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 DKK1O94907 266 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 ZNF883P0CG24 379 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 HNRNPLP14866 589 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC6-233ENST00000489352 TMPRSS3P57727 454 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 TLE3Q04726 772 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 CTTNQ14247 550 aaKnown RBP12.57□□□□□ -0.4
HDAC6-233ENST00000489352 EPHA7Q15375 998 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 IL27RAQ6UWB1 636 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-233ENST00000489352 MAEAQ7L5Y9 396 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 IL17RCQ8NAC3 791 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 MRPS31Q92665 395 aaKnown RBP12.57□□□□□ -0.4
HDAC6-233ENST00000489352 FOXJ1Q92949 421 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 MED8Q96G25 268 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 LGMNQ99538 433 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 TRIM4Q9C037 500 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 KCNK4Q9NYG8 393 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 ANKMY1Q9P2S6 941 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 WNT6Q9Y6F9 365 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 ABCA12Q86UK0 2595 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 OBSL1O75147 1896 aa12.57□□□□□ -0.4
HDAC6-233ENST00000489352 CYP3A7-CYP3A51PA0A087WV96 503 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 CILPO75339 1184 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 ZNF217O75362 1048 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 OAZ2O95190 189 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 VNN2O95498 520 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 NFATC1O95644 943 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 CYP3A7P24462 503 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 ACTN2P35609 894 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 UCNP55089 124 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 SCRN1Q12765 414 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 MGAT5BQ3V5L5 792 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 C4orf17Q53FE4 359 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 NCAPH2Q6IBW4 605 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 SLC41A1Q8IVJ1 513 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 SPACA3Q8IXA5 215 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 EFCAB13Q8IY85 973 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 SNIP1Q8TAD8 396 aaKnown RBP12.56□□□□□ -0.4
HDAC6-233ENST00000489352 BAHD1Q8TBE0 780 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-233ENST00000489352 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 NACC1Q96RE7 527 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDAC6-233ENST00000489352 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 PAXBP1Q9Y5B6 917 aa12.56□□□□□ -0.4
HDAC6-233ENST00000489352 TIMM13Q9Y5L4 95 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-233ENST00000489352 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
HDAC6-233ENST00000489352 A0A1B0GTW7 788 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 MTMR11A4FU01 709 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 ACKR2O00590 384 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 EDIL3O43854 480 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 APODP05090 189 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 NMT1P30419 496 aaKnown RBP12.55□□□□□ -0.4
HDAC6-233ENST00000489352 HSPA4P34932 840 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 NLRP5P59047 1200 aa12.55□□□□□ -0.4
HDAC6-233ENST00000489352 OSTNP61366 133 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms