RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TPST1O60507 370 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 AKT1P31749 480 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 PPP3CCP48454 512 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 NLRP9Q7RTR0 991 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 KRT35Q92764 455 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 APOL5Q9BWW9 433 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 VCPKMTQ9H867 229 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 P4HA2O15460 535 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 CCDC159P0C7I6 412 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 RAP1GDS1P52306 607 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 MAP3K10Q02779 954 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 SNX31Q8N9S9 440 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 LRRN4CLQ8ND94 238 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 OSGEPQ9NPF4 335 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 MAP3K20Q9NYL2 800 aaKnown RBP18.34■□□□□ 0.53
NPHP4-209ENST00000489180 CDC42BPAQ5VT25 1732 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 C5orf58C9J3I9 102 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 ITGB3P05106 788 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 HSPA1AP0DMV8 641 aaKnown RBP18.34■□□□□ 0.53
NPHP4-209ENST00000489180 HSPA1BP0DMV9 641 aaKnown RBP18.34■□□□□ 0.53
NPHP4-209ENST00000489180 PTGER2P43116 358 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 IRX1P78414 480 aaPredicted RBP18.34■□□□□ 0.53
NPHP4-209ENST00000489180 TROAPQ12815 778 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 CNDP1Q96KN2 507 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 GTF3C4Q9UKN8 822 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 AFF2P51816 1311 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
NPHP4-209ENST00000489180 CUL2Q13617 745 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 FUT11Q495W5 492 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 SEPT8Q92599 483 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 TBC1D23Q9NUY8 699 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
NPHP4-209ENST00000489180 IL18RAPO95256 599 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 ASMTLO95671 621 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 DSG1Q02413 1049 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 MUC3BQ9H195 1237 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 SKAP2O75563 359 aaPredicted RBP18.33■□□□□ 0.53
NPHP4-209ENST00000489180 KCNK10P57789 538 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 PKN3Q6P5Z2 889 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 HPDLQ96IR7 371 aa18.33■□□□□ 0.53
NPHP4-209ENST00000489180 NTSR2O95665 410 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 GYS1P13807 737 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 RFC5P40937 340 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 MRPS35P82673 323 aaKnown RBP18.33■□□□□ 0.52
NPHP4-209ENST00000489180 VEPH1Q14D04 833 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 PDIA6Q15084 440 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 FBXO33Q7Z6M2 555 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 RIT2Q99578 217 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 SLC30A1Q9Y6M5 507 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF189O75820 626 aaPredicted RBP18.33■□□□□ 0.52
NPHP4-209ENST00000489180 NCAM1P13591 858 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 PLIN5Q00G26 463 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 CBWD2Q8IUF1 395 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 LPAR1Q92633 364 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 POP1Q99575 1024 aaKnown RBP18.33■□□□□ 0.52
NPHP4-209ENST00000489180 ANKZF1Q9H8Y5 726 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 L1RE1Q9UN81 338 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 FAM32AQ9Y421 112 aaKnown RBP18.33■□□□□ 0.52
NPHP4-209ENST00000489180 LRRC8BQ6P9F7 803 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 PRUNE1Q86TP1 453 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 TFB1MQ8WVM0 346 aaKnown RBP18.33■□□□□ 0.52
NPHP4-209ENST00000489180 MAGEB18Q96M61 343 aa18.33■□□□□ 0.52
NPHP4-209ENST00000489180 SEPT5Q99719 369 aaPredicted RBP18.33■□□□□ 0.52
NPHP4-209ENST00000489180 S100A5P33763 92 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 PTPN7P35236 360 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 DEPDC1Q5TB30 811 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 PAPD7Q5XG87 772 aaKnown RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF280CQ8ND82 737 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 SNRNP27Q8WVK2 155 aaKnown RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 DMGDHQ9UI17 866 aaKnown RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 HPSEQ9Y251 543 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 ELMSAN1Q6PJG2 1045 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 ATP8B4Q8TF62 1192 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 PIDD1Q9HB75 910 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 TADA2AO75478 443 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 OCM2P0CE71 109 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 OCMP0CE72 109 aaPredicted RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 ITIH4Q14624 930 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 NBPF20Q3BBV1 942 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 MEI1Q5TIA1 1274 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 ADCK2Q7Z695 626 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 DDX53Q86TM3 631 aaKnown RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 KIRREL3Q8IZU9 778 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 SCFD2Q8WU76 684 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 NPTXRO95502 500 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 ZCCHC18P0CG32 403 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 TWF1Q12792 350 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 TTI2Q6NXR4 508 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 CCDC81Q6ZN84 652 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 DAGLBQ8NCG7 672 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 GFM2Q969S9 779 aaKnown RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 TMEM39BQ9GZU3 492 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 EXOSC4Q9NPD3 245 aaKnown RBP18.32■□□□□ 0.52
NPHP4-209ENST00000489180 NSMCE4AQ9NXX6 385 aa18.32■□□□□ 0.52
NPHP4-209ENST00000489180 PSTPIP1O43586 416 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 CDH2P19022 906 aaPredicted RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 NUMBP49757 651 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms