RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MMS19Q96T76 1030 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 PKMYT1Q99640 499 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 ACBD6Q9BR61 282 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 MKNK1Q9BUB5 465 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 TRMT61BQ9BVS5 477 aaKnown RBP15.04■□□□□ -0
VTI1A-206ENST00000489142 SMG9Q9H0W8 520 aaKnown RBP15.04■□□□□ -0
VTI1A-206ENST00000489142 BRD9Q9H8M2 597 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 HSFX1Q9UBD0 423 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 MAGED2Q9UNF1 606 aaPredicted RBP15.04■□□□□ -0
VTI1A-206ENST00000489142 ASB3Q9Y575 518 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 USP34Q70CQ2 3546 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 VPS13AQ96RL7 3174 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 KANSL1LA0AUZ9 987 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 MYBPHLA2RUH7 354 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 CLSTN1O94985 981 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 RPN1P04843 607 aaKnown RBP15.03■□□□□ -0
VTI1A-206ENST00000489142 PSMC3P17980 439 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 SNRPFP62306 86 aaKnown RBP15.03■□□□□ -0
VTI1A-206ENST00000489142 DDR2Q16832 855 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 ARID3BQ8IVW6 561 aaPredicted RBP15.03■□□□□ -0
VTI1A-206ENST00000489142 C12orf56Q8IXR9 622 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 SHDQ96IW2 340 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 MRPL45Q9BRJ2 306 aaKnown RBP15.03■□□□□ -0
VTI1A-206ENST00000489142 SCAND2PQ9GZW5 306 aaPredicted RBP15.03■□□□□ -0
VTI1A-206ENST00000489142 IL21Q9HBE4 155 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 DLGAP2Q9P1A6 1054 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 USP25Q9UHP3 1055 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 MAPK8IP1Q9UQF2 711 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 GREB1Q4ZG55 1949 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 PIEZO1Q92508 2521 aa15.03■□□□□ -0
VTI1A-206ENST00000489142 FAM237AA0A1B0GTK4 181 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 FAM170BA6NMN3 283 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 GABRDO14764 452 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 PRAMEF12O95522 483 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 PDGFRBP09619 1106 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 MYL6P60660 151 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 PRKCQQ04759 706 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 BECN1Q14457 450 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 NFE2Q16621 373 aaPredicted RBP15.02■□□□□ -0
VTI1A-206ENST00000489142 ARHGAP15Q53QZ3 475 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 KRBA2Q6ZNG9 492 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 FRMD5Q7Z6J6 570 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 SPATA2LQ8IUW3 424 aaPredicted RBP15.02■□□□□ -0
VTI1A-206ENST00000489142 ZFYVE19Q96K21 471 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 LRRC3BQ96PB8 259 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 SYT15Q9BQS2 421 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 DDX23Q9BUQ8 820 aaKnown RBP15.02■□□□□ -0
VTI1A-206ENST00000489142 KCTD10Q9H3F6 313 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 TRPV4Q9HBA0 871 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 CRTAC1Q9NQ79 661 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 NME7Q9Y5B8 376 aa15.02■□□□□ -0
VTI1A-206ENST00000489142 A0A1W2PQ27 194 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 A0A1W2PQ64 194 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 A0A1W2PQD8 194 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 SHISA7A6NL88 538 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 LRRIQ3A6PVS8 624 aaPredicted RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 PHACTR2O75167 634 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 NR3C1P04150 777 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 HMGA1P17096 107 aaKnown RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 TARSP26639 723 aaKnown RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 PCSK1P29120 753 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 LHX1P48742 406 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 DLG4P78352 724 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 SMARCB1Q12824 385 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 DPYDQ12882 1025 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 PSMD2Q13200 908 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 BIRC3Q13489 604 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 TRPC3Q13507 836 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 WDR72Q3MJ13 1102 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 LIMS2Q7Z4I7 341 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 TMEM150AQ86TG1 271 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 SCN4BQ8IWT1 228 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 YAF2Q8IY57 180 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 TTC8Q8TAM2 541 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 MYLPFQ96A32 169 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 GCNAQ96QF7 691 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 GPR88Q9GZN0 384 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 LTB4R2Q9NPC1 389 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 DMAC2Q9NW81 257 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 CGNQ9P2M7 1197 aaKnown RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 NXF1Q9UBU9 619 aaKnown RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 NDRG2Q9UN36 371 aaKnown RBP15.01□□□□□ -0.01
VTI1A-206ENST00000489142 CACNA1IQ9P0X4 2223 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 DMDP11532 3685 aa15.01□□□□□ -0.01
VTI1A-206ENST00000489142 ANAPC1Q9H1A4 1944 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 SLC38A8A6NNN8 435 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 ZNF263O14978 683 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 ZNF202O95125 648 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 FGF19O95750 216 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 WARSP23381 471 aaKnown RBP15□□□□□ -0.01
VTI1A-206ENST00000489142 CDC25CP30307 473 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 RAP1GAPP47736 663 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 SOX9P48436 509 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 NLRP12P59046 1061 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 TNNC1P63316 161 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 CYP27A1Q02318 531 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 MDH1BQ5I0G3 518 aa15□□□□□ -0.01
VTI1A-206ENST00000489142 CEP135Q66GS9 1140 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms