RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 KIAA1549LQ6ZVL6 1849 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 NBEAQ8NFP9 2946 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 PP2D1A8MPX8 630 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 CYP11A1P05108 521 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 PLS3P13797 630 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 DDX6P26196 483 aaKnown RBP eCLIP17.51■□□□□ 0.39
USP48-210ENST00000489108 CDC25AP30304 524 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 DHPSP49366 369 aaPredicted RBP17.51■□□□□ 0.39
USP48-210ENST00000489108 SMTNP53814 917 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 NBR1Q14596 966 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 ENOX2Q16206 610 aaKnown RBP17.51■□□□□ 0.39
USP48-210ENST00000489108 C11orf74Q86VG3 221 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 MON1AQ86VX9 555 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 CPA6Q8N4T0 437 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 STKLD1Q8NE28 680 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 FAM212AQ96EL1 285 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 RPF1Q9H9Y2 349 aaKnown RBP17.51■□□□□ 0.39
USP48-210ENST00000489108 KLK13Q9UKR3 277 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 TSC2P49815 1807 aa17.51■□□□□ 0.39
USP48-210ENST00000489108 SCN1AP35498 2009 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 OBSL1O75147 1896 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 ANTXRLA6NF34 631 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 PIRO00625 290 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 GUCY2CP25092 1073 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 C9orf57Q5W0N0 161 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 JADE1Q6IE81 842 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 TTC16Q8NEE8 873 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 SPPL2BQ8TCT7 592 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 C2orf15Q8WU43 125 aaKnown RBP17.5■□□□□ 0.39
USP48-210ENST00000489108 MRPS31Q92665 395 aaKnown RBP17.5■□□□□ 0.39
USP48-210ENST00000489108 BICD1Q96G01 975 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 TIPINQ9BVW5 301 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 DUS2Q9NX74 493 aaKnown RBP17.5■□□□□ 0.39
USP48-210ENST00000489108 ABI2Q9NYB9 513 aaPredicted RBP17.5■□□□□ 0.39
USP48-210ENST00000489108 KCNG1Q9UIX4 513 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 MAGED2Q9UNF1 606 aaPredicted RBP17.5■□□□□ 0.39
USP48-210ENST00000489108 MSRB2Q9Y3D2 182 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
USP48-210ENST00000489108 ADRB2P07550 413 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 PAX3P23760 479 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 GPR15P49685 360 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 ZNF268Q14587 947 aaPredicted RBP17.49■□□□□ 0.39
USP48-210ENST00000489108 MTF1Q14872 753 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 KRT79Q5XKE5 535 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 ANO7Q6IWH7 933 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 RASSF3Q86WH2 238 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 METTL23Q86XA0 190 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 THEM5Q8N1Q8 247 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 OSCP1Q8WVF1 389 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 TSPAN18Q96SJ8 248 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 FOXP1Q9H334 677 aaPredicted RBP17.49■□□□□ 0.39
USP48-210ENST00000489108 SLC32A1Q9H598 525 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 WNT6Q9Y6F9 365 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 GON4LQ3T8J9 2241 aa17.49■□□□□ 0.39
USP48-210ENST00000489108 PI4KAP42356 2102 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 SPAARA0A1B0GVQ0 90 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 ANO9A1A5B4 782 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 TAF4O00268 1085 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 CYB561D2O14569 222 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 OGTO15294 1046 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 FAM189A1O60320 539 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 MAPK8P45983 427 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 SMARCB1Q12824 385 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 C2orf27AQ580R0 203 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 TRIM61Q5EBN2 209 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 SDHAF4Q5VUM1 108 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 WSCD1Q658N2 575 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 USP33Q8TEY7 942 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 CYP2S1Q96SQ9 504 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
USP48-210ENST00000489108 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 EVLQ9UI08 416 aaPredicted RBP17.48■□□□□ 0.39
USP48-210ENST00000489108 DSEQ9UL01 958 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 PTPRDP23468 1912 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 CACNA1EQ15878 2313 aa17.48■□□□□ 0.39
USP48-210ENST00000489108 K7EQS6 105 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 NFICP08651 508 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 IFNAR2P48551 515 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 LIG4P49917 911 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 SEC13P55735 322 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 FAM160A1Q05DH4 1040 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 LMAN2Q12907 356 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 ZRSR1Q15695 479 aaKnown RBP17.47■□□□□ 0.39
USP48-210ENST00000489108 ZNF77Q15935 545 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 IL17AQ16552 155 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 KYAT1Q16773 422 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 EML3Q32P44 896 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 TTC30AQ86WT1 665 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 CCDC33Q8N5R6 958 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 MDGA1Q8NFP4 955 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 RLN3Q8WXF3 142 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 C8orf76Q96K31 380 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 CNOT6LQ96LI5 555 aaKnown RBP17.47■□□□□ 0.39
USP48-210ENST00000489108 SLC22A12Q96S37 553 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
USP48-210ENST00000489108 PI4K2AQ9BTU6 479 aa17.47■□□□□ 0.39
USP48-210ENST00000489108 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
USP48-210ENST00000489108 LINC00597Q9H2U6 94 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms