RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ZNF276Q8N554 614 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 LRRD1A4D1F6 860 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 CTCFP49711 727 aaPredicted RBP20.51■□□□□ 0.87
HMG20B-213ENST00000488973 GPX6P59796 221 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 KLC1Q07866 573 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 SEPT7Q16181 437 aaKnown RBP20.51■□□□□ 0.87
HMG20B-213ENST00000488973 ADGRD1Q6QNK2 874 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 SPOCD1Q6ZMY3 1216 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 MIPEPQ99797 713 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 VPS11Q9H270 941 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 TCEAL9Q9UHQ7 104 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 EXTL3O43909 919 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 C4BPAP04003 597 aaKnown RBP20.51■□□□□ 0.87
HMG20B-213ENST00000488973 ADRA1DP25100 572 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 RANBP1P43487 201 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 KRT76Q01546 638 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 CUL2Q13617 745 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 PSMD6Q15008 389 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 HIF1AQ16665 826 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 WDR72Q3MJ13 1102 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 ZFYVE27Q5T4F4 411 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 ALKBH8Q96BT7 664 aaKnown RBP20.51■□□□□ 0.87
HMG20B-213ENST00000488973 MRRFQ96E11 262 aaKnown RBP20.51■□□□□ 0.87
HMG20B-213ENST00000488973 BTBD10Q9BSF8 475 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 DHRS4Q9BTZ2 278 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 CADM1Q9BY67 442 aaKnown RBP20.51■□□□□ 0.87
HMG20B-213ENST00000488973 KANSL3Q9P2N6 904 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 PCDHB4Q9Y5E5 795 aa20.51■□□□□ 0.87
HMG20B-213ENST00000488973 PDLIM1O00151 329 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 NPTXRO95502 500 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 CAP2P40123 477 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 VHLP40337 213 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 PIK3CAP42336 1068 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 MUM1Q2TAK8 710 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 GALNT15Q8N3T1 639 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 ZNF333Q96JL9 665 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 FAM84AQ96KN4 292 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 CNTN6Q9UQ52 1028 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 FARP1Q9Y4F1 1045 aaPredicted RBP20.5■□□□□ 0.87
HMG20B-213ENST00000488973 CLUHO75153 1309 aa20.5■□□□□ 0.87
HMG20B-213ENST00000488973 TMEM191CA6NGB0 347 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 CCNE2O96020 404 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TMEM191BP0C7N4 346 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 NOP14P78316 857 aaKnown RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 KHDC1Q4VXA5 237 aaKnown RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TDRD10Q5VZ19 366 aaKnown RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TMEM270Q6UE05 265 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 APBB1IPQ7Z5R6 666 aaPredicted RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 FNBP1Q96RU3 617 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TSC22D3Q99576 134 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 NUMBLQ9Y6R0 609 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 hCG_1818297A0A087WSY0 165 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 NVLO15381 856 aaKnown RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TNNI1P19237 187 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 BAG6P46379 1132 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 RPL7AP62424 266 aaKnown RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 KLHL38Q2WGJ6 581 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TFDP3Q5H9I0 405 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 SPOPLQ6IQ16 392 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 PTCD3Q96EY7 689 aaKnown RBP20.49■□□□□ 0.87
HMG20B-213ENST00000488973 BICD1Q96G01 975 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TRIM55Q9BYV6 548 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 TMOD2Q9NZR1 351 aa20.49■□□□□ 0.87
HMG20B-213ENST00000488973 DNAJC6O75061 913 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 ATP9AO75110 1047 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 RNF8O76064 485 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 HAUS5O94927 633 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 PDHA1P08559 390 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 TCF4P15884 667 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 GLRA2P23416 452 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 RTP1P59025 263 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 RFWD3Q6PCD5 774 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 ANKMY2Q8IV38 441 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 RDM1Q8NG50 284 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 RFWD2Q8NHY2 731 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 TCP10LQ8TDR4 215 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 SYTL5Q8TDW5 730 aaPredicted RBP20.48■□□□□ 0.87
HMG20B-213ENST00000488973 MZB1Q8WU39 189 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 ACSS3Q9H6R3 686 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 MANSC1Q9H8J5 431 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 MAP3K20Q9NYL2 800 aaKnown RBP20.48■□□□□ 0.87
HMG20B-213ENST00000488973 DCTN4Q9UJW0 460 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 EIF4E1BA6NMX2 242 aaKnown RBP20.48■□□□□ 0.87
HMG20B-213ENST00000488973 TCP10L2B9ZVM9 353 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 SGK1O00141 431 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 MMP8P22894 467 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 LMBRD2Q68DH5 695 aaPredicted RBP20.48■□□□□ 0.87
HMG20B-213ENST00000488973 IRGCQ6NXR0 463 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 BANPQ8N9N5 519 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 PYROXD1Q8WU10 500 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 FAM136AQ96C01 138 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 NSL1Q96IY1 281 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 NMRK1Q9NWW6 199 aa20.48■□□□□ 0.87
HMG20B-213ENST00000488973 GSC2O15499 205 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 VNN1O95497 513 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 TFDP1Q14186 410 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 PGM5Q15124 567 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 SLC35B2Q8TB61 432 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms