RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 FOXQ1Q9C009 403 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 ZNF334Q9HCZ1 680 aaPredicted RBP14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 TRPV5Q9NQA5 729 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 COL4A3Q01955 1670 aa14.81□□□□□ -0.04
SPTLC1-207ENST00000488921 MYO15AQ9UKN7 3530 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 GREB1Q4ZG55 1949 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 PIEZO1Q92508 2521 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 A0A1W2PQ27 194 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 A0A1W2PQ64 194 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 A0A1W2PQD8 194 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 HEPACAM2A8MVW5 462 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 NRG2O14511 850 aaPredicted RBP14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 DPYSL4O14531 572 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 GABRDO14764 452 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 ZNF263O14978 683 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 NCAM2O15394 837 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 DCNP07585 359 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 CSH1P0DML2 217 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 CSH2P0DML3 217 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 ACAT1P24752 427 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 GDI1P31150 447 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 NBL1P41271 181 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 AP3M2P53677 418 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 STK4Q13043 487 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 UBXN2BQ14CS0 331 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 MAPRE1Q15691 268 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 SOWAHAQ2M3V2 549 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 CFAP221Q4G0U5 840 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 GPR158Q5T848 1215 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 ZNF852Q6ZMS4 543 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 C4orf50Q6ZRC1 276 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 SPATA2LQ8IUW3 424 aaPredicted RBP14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 FSIP1Q8NA03 581 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 KIAA0895Q8NCT3 520 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 TMEM174Q8WUU8 243 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 PHOX2BQ99453 314 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 PI4K2AQ9BTU6 479 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 BCO2Q9BYV7 579 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 LTB4R2Q9NPC1 389 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 HEBP1Q9NRV9 189 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 OBP2AQ9NY56 170 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 UXTQ9UBK9 157 aaPredicted RBP14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 CACNA1HO95180 2353 aa14.8□□□□□ -0.04
SPTLC1-207ENST00000488921 PROB1E7EW31 1015 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 MAN2B1O00754 1011 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 PDXKO00764 312 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 STAU1O95793 577 aaKnown RBP14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 RPN1P04843 607 aaKnown RBP14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 DDX6P26196 483 aaKnown RBP eCLIP14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 WEE1P30291 646 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 VIPR2P41587 438 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 HELZP42694 1942 aaKnown RBP14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 NDUFA8P51970 172 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 TNNC1P63316 161 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 TRPC3Q13507 836 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 USP34Q70CQ2 3546 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 LIMS2Q7Z4I7 341 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 OSTM1Q86WC4 334 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 SLC9A9Q8IVB4 645 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 ARID3BQ8IVW6 561 aaPredicted RBP14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 FANCMQ8IYD8 2048 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 GIPC2Q8TF65 315 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 MSANTD3Q96H12 275 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 MMS19Q96T76 1030 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 PKMYT1Q99640 499 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 TASP1Q9H6P5 420 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 TMLHEQ9NVH6 421 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 DLGAP2Q9P1A6 1054 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 GTF3C4Q9UKN8 822 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
SPTLC1-207ENST00000488921 SOBPA7XYQ1 873 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 CHADO15335 359 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 PHACTR2O75167 634 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 FAM163BP0C2L3 166 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 GLULP15104 373 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 WARSP23381 471 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 ATICP31939 592 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 CYP4F8P98187 520 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 FCHO2Q0JRZ9 810 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 STXBP5Q5T5C0 1151 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 C1orf228Q6PIY5 440 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 C1orf210Q8IVY1 113 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 CSGALNACT1Q8TDX6 532 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 KBTBD7Q8WVZ9 684 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 MKNK1Q9BUB5 465 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 IL21Q9HBE4 155 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 ANAPC1Q9H1A4 1944 aa14.78□□□□□ -0.04
SPTLC1-207ENST00000488921 FAM170BA6NMN3 283 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 CALUO43852 315 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 GFRA3O60609 400 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 TACC1O75410 805 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 RHOBTB3O94955 611 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 CLSTN1O94985 981 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 CYP2F1P24903 491 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 TARSP26639 723 aaKnown RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 MAGEA11P43364 429 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 CDR1P51861 262 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 MLLT6P55198 1093 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms