RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 REEP2Q9BRK0 252 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 PCIF1Q9H4Z3 704 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 LGALS13Q9UHV8 139 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 WDR37Q9Y2I8 494 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 RALAP11233 206 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 RAG1P15918 1043 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 RPL10P27635 214 aaKnown RBP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 CIITAP33076 1130 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 VCPP55072 806 aaKnown RBP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ARHGAP24Q8N264 748 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 HAS1Q92839 578 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 GPR88Q9GZN0 384 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 IL1RAPL1Q9NZN1 696 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 SMIM31A0A1B0GVY4 71 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 MIF4GDA9UHW6 222 aaKnown RBP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ADCY6O43306 1168 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 MED24O75448 989 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 RPL5P46777 297 aaKnown RBP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 NCKAP1LP55160 1127 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 TFDP1Q14186 410 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 FRMD5Q7Z6J6 570 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ICA1LQ8NDH6 482 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-229ENST00000488765 FAM84AQ96KN4 292 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 NCANO14594 1321 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 ZBTB39O15060 712 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 TBC1D12O60347 775 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 KRT10P13645 584 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 CD58P19256 250 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 BTDP43251 543 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 C6orf52Q5T4I8 152 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 UGT2A3Q6UWM9 527 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 ACAP3Q96P50 834 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 CIDEBQ9UHD4 219 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 PIK3R2O00459 728 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 BMP3P12645 472 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 LPIN1Q14693 890 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 TMC7Q7Z402 723 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 FNDC8Q8TC99 324 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 S100A14Q9HCY8 104 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 TBC1D30Q9Y2I9 924 aa16.97■□□□□ 0.31
MCF2L-229ENST00000488765 A8MXQ7 604 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 TYROBPO43914 113 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 DLDP09622 509 aaKnown RBP16.96■□□□□ 0.31
MCF2L-229ENST00000488765 CD97P48960 835 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 TCP10Q12799 353 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 ZCCHC23Q6ZST2 131 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 PATL1Q86TB9 770 aaKnown RBP16.96■□□□□ 0.31
MCF2L-229ENST00000488765 HPS6Q86YV9 775 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 RHOT2Q8IXI1 618 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 SKA1Q96BD8 255 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 XPNPEP1Q9NQW7 623 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 RPL26L1Q9UNX3 145 aaKnown RBP16.96■□□□□ 0.31
MCF2L-229ENST00000488765 TRIM17Q9Y577 477 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 TISP43B9A030 160 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 SPECC1L-ADORA2AF8WAN1 911 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 ZFXP17010 805 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-229ENST00000488765 HSPA6P17066 643 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 DMPKQ09013 629 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 DENND5BQ6ZUT9 1274 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 SLC47A2Q86VL8 602 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.31
MCF2L-229ENST00000488765 USP17L5A8MUK1 530 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 FBP2O00757 339 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 TMED10P49755 219 aaKnown RBP16.96■□□□□ 0.31
MCF2L-229ENST00000488765 DLG4P78352 724 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 GRM4Q14833 912 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 OGFOD2Q6N063 350 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 ATP11CQ8NB49 1132 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 EBF4Q9BQW3 602 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 LRRC19Q9H756 370 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 ANAPC7Q9UJX3 599 aa16.96■□□□□ 0.31
MCF2L-229ENST00000488765 CYB561D2O14569 222 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 TM7SF2O76062 418 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 FMO5P49326 533 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 MARSP56192 900 aaKnown RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 SULT2A1Q06520 285 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 GPS1Q13098 491 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 GRAPQ13588 217 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 ATP13A4Q4VNC1 1196 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 RNF148Q8N7C7 305 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 CFAP57Q96MR6 1250 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 POLR3CQ9BUI4 534 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-229ENST00000488765 NACA2Q9H009 215 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 CCDC88AQ3V6T2 1871 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 P4HA2O15460 535 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 PROCP04070 461 aa16.95■□□□□ 0.3
MCF2L-229ENST00000488765 SLC16A2P36021 539 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms